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Ranavirus could facilitate local extinction of rare amphibian species

  • Conservation ecology – original research
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Abstract

There is growing evidence that pathogens play a role in population declines and species extinctions. For small populations, disease-induced extinction may be especially probable. We estimated the susceptibility of two amphibian species of conservation concern (the dusky gopher frog [Lithobates sevosus] and boreal toad [Anaxyrus boreas boreas]) to an emerging pathogen (ranavirus) using laboratory challenge experiments, and combined these data with published demographic parameter estimates to simulate the potential effects of ranavirus exposure on extinction risk. We included effects of life stage during pathogen exposure, pathogen exposure interval, hydroperiod of breeding habitat, population carrying capacity, and immigration in simulations. We found that both species were highly susceptible to ranavirus when exposed to the pathogen in water at environmentally relevant concentrations. Dusky gopher frogs experienced 100 % mortality in four of six life stages tested. Boreal toads experienced 100 % mortality when exposed as tadpoles or metamorphs, which were the only life stages tested. Simulations showed population declines, greater extinction probability, and faster times to extinction with ranavirus exposure. These effects were more evident with more frequent pathogen exposure intervals and lower carrying capacity. Immigration at natural rates did little to mitigate effects of ranavirus exposure unless immigration occurred every 2 years. Our results demonstrate that disease-induced extinction by emerging pathogens, such as ranavirus, is possible, and that threat may be especially high for species with small population sizes. For the species in this study, conservation organizations should incorporate ranavirus surveillance into monitoring programs and devise intervention strategies in the event that disease outbreaks occur.

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References

  • Amos W, Harwood J (1998) Factors affecting levels of genetic diversity in natural populations. Philos Trans R Soc Lond B Biol Sci 353:177–186

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Biek R, Funk WC, Maxwell BA, Mills LS (2002) What is missing in amphibian decline research: insights from ecological sensitivity analysis. Conserv Biol 16:728–734

    Article  Google Scholar 

  • Brenes R (2013) Mechanisms contributing to the emergence of ranavirus in ectothermic vertebrate communities. PhD, Department of Forestry, Fisheries and Wildlife, University of Tennessee

  • Brenes R, Miller DL, Waltzek TB, Wilkes RP, Tucker JL (2014) Susceptibility of fish and turtles to three ranaviruses isolated from different ectothermic vertebrate classes. J Aquat Anim Health 26:118–126

    Article  PubMed  Google Scholar 

  • Brunner JL, Schock DM, Davidson EW, Collins JP (2004) Intraspecific reservoirs: complex life history and the persistence of a lethal ranavirus. Ecology 85:560–566

    Article  Google Scholar 

  • Brunner JL, Storfer A, Gray MJ, Hoverman JT (2015) Ranavirus ecology and evolution: from epidemiology to extinction. In: Gray MJ, Chinchar VG (eds) Ranaviruses: lethal pathogens of ectothermic vertebrates. Springer, Secaucus

    Google Scholar 

  • Carey C, Corn PS, Jones MS, Livo LJ, Muths E, Loeffler CW (2005) Factors limiting the recovery of boreal toads (Bufo b. boreas). In: Lanoo M (ed) Amphibian declines. University of California Press, Berkeley, pp 222–236

    Chapter  Google Scholar 

  • Caswell H (2001) Matrix population models: construction, analysis, and interpretation, 2nd edn. Sinauer Associates, Sunderland

    Google Scholar 

  • Cheng K, Jones MEB, Jancovich JK, Burchell J, Schrenzel MD, Reavill DR, Imai DM, Urban A, Kirkendall M, Woods LW, Chinchar VG, Pessier AP (2014) Isolation of a Bohle-like iridovirus from boreal toads housed within a cosmopolitan aquarium collection. Dis Aquat Org 111:139–152

    Article  CAS  PubMed  Google Scholar 

  • Converse KA, Green DE (2005) Diseases of tadpoles. In: Majundar SK, Huffman JE, Brenner FJ, Panah AL (eds) Wildlife diseases: landscape epidemiology, spatial distribution, and utilization of remote sensing technology. The Pennsylvania Academy of Science, Easton, pp 72–88

    Google Scholar 

  • de Castro F, Bolker BM (2005) Mechanisms of disease-induced extinction. Ecol Lett 8:117–126

    Article  Google Scholar 

  • Duffus ALJ, Waltzek TB, Stöhr AC, Allender MC, Gotesman M, Whittington RJ, Hick P, Hines MK, Marschang RE (2015) Distribution and host range of ranaviruses. In: Gray MJ, Chinchar VG (eds) Ranaviruses: lethal pathogens of ectothermic vertebrates. Springer, Secaucus

    Google Scholar 

  • Earl JE, Gray MJ (2014) Introduction of ranavirus to isolated wood frog populations could cause local extinction. EcoHealth 11:581–592

    Article  PubMed  Google Scholar 

  • Echaubard P, Pauli BD, Trudeau VL, Lesbarrères D (2016) Ranavirus infection in northern leopard frogs: the timing and number of exposures matter. J Zool 298:30–36

    Article  Google Scholar 

  • Gog J, Woodroffe R, Swinton J (2002) Disease in endangered metapopulations: the importance of alternative hosts. Proc R Soc B 269:671–676

    Article  PubMed  PubMed Central  Google Scholar 

  • Gosner KL (1960) A simple table for staging anuran embryos with notes on identification. Herpetologica 16:183–190

    Google Scholar 

  • Granoff A, Came PE, Rafferty KA (1965) The isolation and properties of viruses from Rana pipiens: their possible relationship to the renal adenocarcinoma of the leopard frog. Ann N Y Acad Sci 126:237–255

    Article  CAS  PubMed  Google Scholar 

  • Gray MJ, Brunner JL, Earl JE, Ariel E (2015a) Design and analysis of ranavirus studies: surveillance and assessing risk. In: Gray MJ, Chinchar VG (eds) Ranaviruses: lethal pathogens of ectothermic vertebrates. Springer, Secaucus

    Chapter  Google Scholar 

  • Gray MJ, Lewis JP, Nanjappa P, Klocke B, Pasmans F, Martel A, Stephen C, Olea GP, Smith SA, Saacerdote-Velat A, Christman MR, Williams JM, Olson DH (2015b) Batrachochytrium salamandrivorans: the North American response and a call for action. PLoS Pathog 11:e1005251

    Article  PubMed  PubMed Central  Google Scholar 

  • Grayfer L, Edholm E-S, Andino FD, Chinchar VG, Robert J (2015) Ranavirus host immunity and immune evasion. In: Gray MJ, Chinchar VG (eds) Ranaviruses: lethal pathogens of ectothermic vertebrates. Springer, Secaucus, pp 141–170

    Google Scholar 

  • Green DE, Converse KA, Schrader AK (2002) Epizootiology of sixty-four amphibian morbidity and mortality events in the USA, 1996–2001. Ann N Y Acad Sci 969:323–339

    Article  PubMed  Google Scholar 

  • IUCN SSC Amphibian Specialist Group (2015) Lithobates sylvaticus. The IUCN Red List of Threatened Species 2015:e.T58728A78907321

  • Haislip NA, Gray MJ, Hoverman JT, Miller DL (2011) Development and disease: how susceptibility to an emerging pathogen changes through anuran development. PLoS One 6:e22307

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Hall EM, Crespi EJ, Goldberg CS, Brunner JL (2016) Evaluating environmental DNA-based quantification of ranavirus infection in wood frog populations. Mol Ecol Resour 16:423–433

    Article  CAS  PubMed  Google Scholar 

  • Harper EB, Rittenhouse TAG, Semlitsch RD (2008) Demographic consequences of terrestrial habitat loss for pool-breeding amphibians: predicting extinction risks associated with inadequate size of buffer zones. Conserv Biol 22:1205–1215

    Article  PubMed  Google Scholar 

  • Hoverman JT, Gray MJ, Haislip NA, Miller DL (2011) Phylogeny, life history, and ecology contribute to differences in amphibian susceptibility to ranaviruses. EcoHealth 8:301–319

    Article  PubMed  Google Scholar 

  • Jackson T (2008) Report on the status and conservation of the boreal toad Bufo boreas boreas in the Southern Rock Mountains 2006–2007. Wildlife CDo (ed) Colorado Division of Wildlife, Denver, p 134

  • Johnson AF, Brunner JL (2014) Persistence of an amphibian ranavirus in aquatic communities. Dis Aquat Org 111:129–138

    Article  CAS  PubMed  Google Scholar 

  • Mallawaarachchi DK, Allen LJS, Carey C (2011) Stability and permanence in gender- and stage-structured models for the boreal toad. J Biol Dyn 5:1–26

    Article  CAS  PubMed  Google Scholar 

  • McCallum H, Dobson A (2002) Disease, habitat fragmentation and conservation. Proc R Soc B 269:2041–2049

    Article  PubMed  PubMed Central  Google Scholar 

  • Miller DL, Rajeev S, Gray MJ, Baldwin CA (2007) Frog virus 3 infection, cultured American bullfrogs. Emerg Infect Dis 13:342–343

    Article  PubMed  PubMed Central  Google Scholar 

  • Miller DL, Gray MJ, Storfer A (2011) Ecopathology of ranaviruses infecting amphibians. Viruses 3:2351–2373

    Article  PubMed  PubMed Central  Google Scholar 

  • Miller DL, Pessier AP, Hick P, Whittington RJ (2015) Comparative pathology of ranaviruses and diagnostic techniques. In: Gray MJ, Chinchar VG (eds) Ranaviruses: lethal pathogens of ectothermic vertebrates. Springer, Secaucus

    Google Scholar 

  • Muths E, Gallant AL, Grant EHC, Battaglin WA, Green DE, Staiger JS, Walls SC, Gunzburger MS, Kearney RF (2006a) The amphibian research and monitoring initiative (ARMI): 5-year report. Interior UDo, Survey UG (eds) US Geological Survey Scientific Investigations Report 2006-5224, p 77

  • Muths E, Scherer RD, Corn PS, Lambert BA (2006b) Estimation of temporary emigration in male toads. Ecology 87:1048–1056

    Article  PubMed  Google Scholar 

  • Muths E, Scherer RD, Lambert BA (2010) Unbiased survival estimates and evidence for skipped breeding opportunities in females. Methods Ecol Evol 1:123–130

    Article  Google Scholar 

  • Muths E, Bailey LL, Watry MK (2014) Animal reintroductions: an innovative assessment of survival. Biol Conserv 172:200–208

    Article  Google Scholar 

  • Nazir J, Spengler M, Marschang RE (2012) Environmental persistence of amphibian and reptilian ranaviruses. Dis Aquat Org 98:177–184

    Article  CAS  PubMed  Google Scholar 

  • Pearman PB, Garner TWJ (2005) Susceptibility of Italian agile frog populations to an emerging strain of ranavirus parallels population genetic diversity. Ecol Lett 8:401–408

    Article  Google Scholar 

  • Petranka JW, Harp EM, Holbrook CT, Hamel JA (2007) Long-term persistence of amphibian populations in a restored wetland complex. Biol Conserv 138:371–380

    Article  Google Scholar 

  • Price SJ, Garner TWJ, Nichols RA, Balloux F, Ayres C, Mora-Cabello de Alba A, Bosch J (2014) Collapse of amphibian communities due to an introduced Ranavirus. Curr Biol 24:1–6

    Article  Google Scholar 

  • R Development Core Team (2008) R: a language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. http://www.R-project.org

  • Richter SC, Seigel RA (2002) Annual variation in the population ecology of the endangered gopher frog, Rana sevosa Goin and Netting. Copeia 2002:962–972

    Article  Google Scholar 

  • Richter SC, Young JE, Johnson GN, Seigel RA (2003) Stochastic variation in reproductive success of a rare frog, Rana sevosa: implications for conservation and for monitoring amphibian populations. Biol Conserv 111:171–177

    Article  Google Scholar 

  • Richter SC, Crother BI, Broughton RE (2009) Genetic consequences of population reduction and geographic isolation in the critically endangered frog, Rana sevosa. Copeia 2009:801–808

    Article  Google Scholar 

  • Rojas S, Richards K, Jancovich JK, Davidson EW (2005) Influence of temperature on Ranavirus infection in larval salamanders Ambystoma tigrinum. Dis Aquat Org 63:95–100

    Article  PubMed  Google Scholar 

  • Schloegel LM, Picco AM, Kilpatrick AM, Davies AJ, Hyatt AD, Daszak P (2009) Magnitude of the US trade in amphibians and presence of Batrachochytrium dendrobatidis and ranavirus infection in imported North American bullfrogs (Rana catesbeiana). Biol Conserv 142:1420–1426

    Article  Google Scholar 

  • Seigel RA, Dinsmore A, Richter SC (2006) Using well water to increase hydroperiod as a management option for pond-breeding amphibians. Wildl Soc Bull 34:1022–1027

    Article  Google Scholar 

  • Smith KF, Sax DF, Lafferty KD (2006) Evidence for the role of infectious disease in species extinction and endangerment. Conserv Biol 20:1349–1357

    Article  PubMed  Google Scholar 

  • Storfer A, Alfaro ME, Ridenhour BJ, Jancovich JK, Mech SG, Parris MJ, Collins JP (2007) Phylogenetic concordance analysis shows an emerging pathogen is novel and endemic. Ecol Lett 10:1075–1083

    Article  PubMed  Google Scholar 

  • Sutton WB, Gray MJ, Hardman RH, Wilkes RP, Kouba AJ, Miller DL (2014) High susceptibility of the endangered dusky gopher frog to ranavirus. Dis Aquat Org 112:9–16

    Article  PubMed  Google Scholar 

  • Switzer JF, Johnson R, Lubinski BA, King TL (2009) Genetic structure in the Anaxyrus boreas species group (Anura, Bufonidae): an evaluation of the Southern Rocky Mountain population. USFWS, p 37

  • Teacher AGF, Cunningham AA, Garner TWJ (2010) Assessing the long-term impact of Ranavirus infection in wild common frog populations. Anim Conserv 13:514–522

    Article  Google Scholar 

  • Wells KD (2007) The ecology and behavior of amphibians. University of Chicago Press, Chicago

    Book  Google Scholar 

  • Wheelwright NT, Gray MJ, Hill RD, Miller DL (2014) Sudden mass die-off of a large population of wood frog (Lithobates sylvaticus) tadpoles in Maine, USA, likely due to ranavirus. Herpetol Rev 45:240–242

    Google Scholar 

  • Woodhams DC, Bosch J, Briggs CJ, Cashins S, Davis LR, Lauer A, Muths E, Puschendorf R, Schmidt BR, Sheafor B, Voyles J (2011) Mitigating amphibian disease: strategies to maintain wild populations and control chytridiomycosis. Front Zool 8:8

    Article  PubMed  PubMed Central  Google Scholar 

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Acknowledgments

Funding for this research was provided by the University of Tennessee Institute of Agriculture (UTIA) and for the dusky gopher frog challenges by the Morris Animal Foundation (Grant #D14ZO-055). We thank Bobby Simpson and Roger Long with the UTIA East Tennessee Research and Education Center for providing laboratory space and logistical support. This work was partially conducted while a Postdoctoral Fellow (JEE) at the National Institute for Mathematical and Biological Synthesis, an Institute sponsored by the National Science Foundation, the US Department of Homeland Security, and the US Department of Agriculture through NSF Award #EF-0832858, with additional support from The University of Tennessee, Knoxville. Further postdoctoral support (JEE) was provided by the South Central Climate Science Center. The authors would like to thank the Institute of Museum and Library Services (IMLS) National Leadership Grant LG-25-09-0064-09, for funding the research that produced the captive-bred Mississippi Gopher Frogs and Boreal Toads. Finally, we thank David Lesbarrères and two anonymous referees for comments that improved our manuscript. Laboratory research was approved under the University of Tennessee IACUC protocol #2140 and USFWS permit #TE171493-0 (dusky gopher frogs).

Author contribution statement

JEE and MJG conceived the study and led analyses and manuscript writing, JCC, WBS, and CEL performed the laboratory experiments, AJK, CL, and JK propagated the animals for the experiments, RPW replicated and titrated the virus, RDH and DLM lead the qPCR and histopathology, and all authors contributed to manuscript revision.

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Correspondence to Julia E. Earl.

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Communicated by Pieter Johnson.

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Earl, J.E., Chaney, J.C., Sutton, W.B. et al. Ranavirus could facilitate local extinction of rare amphibian species. Oecologia 182, 611–623 (2016). https://doi.org/10.1007/s00442-016-3682-6

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