Abstract
The gilthead sea bream (Sparus aurata L.) is one of the most important marine fish species produced in southern European countries. Over the last two decades, microsatellites have become a powerful tool for DNA studies of fish populations, making it possible to establish existing genealogical relationships between individuals and to perform reliable estimates of genetic parameters. In the present study, a total of 7959 fish (494 breeders and 7465 fry) were genotyped using two rounds of multiplex reactions with four microsatellite markers each. Offspring were assigned based on the Mendelian exclusion principles, using FAP program. Genealogical information was successfully obtained for more than 83 % of the progeny. Heritability estimates were close to 0.40 in all cases and for all considered traits. The lowest value was for the length at first age (350 ± 6 dph) and the highest for the length at the second age (500 ± 7 dph). The heritabilities for the first and the second weight were similar although somewhat higher for the second age, but not significant. The highest genetic correlations were found between weight and length at the same age and the lowest between weight and length at different ages. Based on the results of this study, it seems reasonable to expect that the implementation of a breeding program for improved growth in this population of gilthead sea bream will offer comparable performances to those achieved in other populations and species of great success in aquaculture around the world.
Similar content being viewed by others
References
Antonello J, Massault C, Franch R, Haley C, Pellizzari C, Bovo G, Patarnello T, Koning D, Bargelloni L (2009) Estimates of heritability and genetic correlation for body length and resistance to fish pasteurellosis in the gilthead sea bream (Sparus aurata L.). Aquaculture 298:29–35
APROMAR (2015) La acuicultura en España. (https://drive.google.com/file/d/0B4_4E-v9oqL_WUgtUzNrdE1MSzQ/view)
Batargias C, Dermitzakis E, Magoulas A, Zouros E (1999) Characterization of six polymorphic microsatellite markers in gilthead sea bream, Sparus aurata. Mol Ecol 8:897–898
Borrell Y, Gallego V, García-Fernández C, Mazzeo I, Pérez L, Asturiano JF, Carleos CE, Vázquez E, Sánchez JA, Blanco G (2011) Assessment of parental contributions to fast- and slow-growing progenies in the sea bream Sparus aurata L. using a new multiplex PCR. Aquaculture 314:58–65
Brown RC, Tsalavouta M, Terzoglou V, Magoulas A, McAndrew BJ (2005a) Additional microsatellites for Sparus aurata and cross-species amplification within the Sparidae family. Mol Ecol 5:605–607
Brown RC, Woolliams JA, McAdrew BJ (2005b) Factors influencing effective population size in commercial populations of gilthead sea bream, Sparus aurata. Aquaculture 247:219–225
Castro J, Pino A, Hermida M, Bouza C, Chavarrías D, Merino P, Sánchez L, Martínez P (2007) A microsatellite marker tool for parentage assessment in gilthead sea bream (Sparus aurata). Aquaculture 272(Supplement 1):210–216
Chavanne H, Parati K, Cambuli C, Capoferri R, Jiménez CA, Galli A (2014) Microsatellites markers to depict the reproductive and genetic patterns of farmed gilthead sea bream (Sparus aurata): illustration by a case study on mass spawning. Aquacult Res. doi:10.1111/are.12013
Chavanne H, Janssen K, Hofherr J, Aquatrace Consortium, Contini F, Haffray P, Komen H, Nielsen EE, Bargelloni L (2016) A comprehensive survey on selective breeding programs and seed market in the European aquaculture fish industry. Int Aquacult. doi:10.1007/s10499-016-9985-0
Franch R, Louro B, Tsalavouta M, Chatziplis D, Tsigenopoulos CS, Sarropoulou E, Antonello J, Magoulas A, Patarnello T, Power DM, Kotoulas G, Bargelloni L (2006) A genetic linkage map of the hermaphrodite teleost fish Sparus aurata L. Genetics 174:851–861
García-Celdrán M, Ramis G, Manchado M, Estévez A, Afonso JM, María-Dolores E, Peñalver J, Armero E (2015) Estimates of heritabilities and genetic correlations of growth and external skeletal deformities at different ages in a reared gilthead sea bream (Sparus aurata L.) population sourced from three broodstocks along the Spanish coasts. Aquaculture 445:33–41
Gjedrem T, Thodesen J (2005) Selection. In: Gjedrem T (ed) Selection and breeding programs in aquaculture. Springer, Berlin, pp 89–111
Gjerde B (1986) Growth and reproduction in fish and shellfish. Aquaculture 57:37–55
Jones AG, Kvarnemo C, Moore GI, Simmons LW, Avise JC (1998) Microsatellite evidence for monogamy and sex-biased recombination in the Western Australian seahorse, Hippocampus angustus. Mol Ecol 7:1497–1505
Knibb W (2000) Genetic improvement of marine fish—Which method for the industry? Aquacult Int 31:11–23
Knibb W, Gorshkova G, Gorshkov S (1997) Selection for growth in the gilthead sea bream, Sparus aurata L. Isr J Aquacult Bamidgeh 49:57–66
Kovac M, Groeneveld E, García-Cortés LA (2002) VCE-5: a package for the optimization of dispersion parameters. In: Proceedings of the 7th world congress of genetics applied to livestock production, Montpellier, France, 20–23 Aug 2002
Launey S, Krieg F, Haffray P, Bruant JS, Vanniers A, Guyomard R (2003) Twelve new microsatellite markers for gilthead sea bream (Sparus aurata): characterization, polymorphism and linkage. Mol Ecol 3:457–459
Lee-Montero I, Navarro A, Negrín-Báez D, Zamorano MJ, Borrell Pichs YJ, Berbel C, Sánchez JA, García-Celdran M, Manchado M, Estévez A, Armero E, Afonso JM (2015) Genetic parameters and genotype–environment interactions for skeleton deformities and growth traits at different ages on gilthead sea bream (Sparus aurata L.) in four Spanish regions. Anim Genet 46(2):164–174
Legarra A, Varona L, de Maturana EL, (2008) Program TM. http://snp.toulouse.inra.fr/~alegarra
Martínez P, Fernández J (2008) Estimating parentage relationships using molecular markers in aquaculture. In: Schwartz SH (ed) Aquaculture research trends. Nova Science Publishers, New York, pp 59–112
Meuwissen THE (1997) Maximizing the response of selection with predefined rate of inbreeding. J Anim Sci 75:934–940
Misztal I, Tsuruta S, Strabel T, Auvray B, Druet T, Lee DH (2002) BLUPF90 Andre lated programs (BGF90). In: Proceedings of the 7th world congress on genetics applied to livestock production, Montpellier, France, 20–23 Aug 2002
Navarro A, Badilla R, Zamorano MJ, Pasamontes V, Hildebrandt S, Sánchez JJ, Afonso JM (2008) Development of two new microsatellite multiplex PCRs for three sparid species: gilthead sea bream (Sparus aurata L.), red porgy (Pagrus pagrus L.) and redbanded sea bream (P. auriga, Valenciennes, 1843) and their application to paternity studies. Aquaculture 285:30–37
Navarro A, Zamorano MJ, Hildebrandt S, Ginés R, Aguilera C, Afonso JM (2009) Estimates of heritabilities and genetic correlations for growth and carcass traits in gilthead sea bream (Sparus aurata L.), under industrial conditions. Aquaculture 289:225–230
Neira R, Días NF, Gall GAE, Gallardo JA, Lhorente AC, Manterola R (2006) Genetic improvement in coho salmon (Oncorhynchus kisutch). I: selection response and inbreeding depression on harvest weight. Aquaculture 257:9–17
Nejati-Javaremi A, Smith C, Gibson JP (1997) Effect of total allelic relationship on accuracy of evaluation and response to selection. J Anim Sci 75:1738–1745
O’Flynn FM, Bailey JK, Friars GW (1999) Responses to two generations of index selection in Atlantic salmon (Salmo salar). Aquaculture 173:143–147
Porta J, Porta JM, Bejar J, Alvarez MD (2010) Development of a microsatellite multiplex genotyping tool for the fish Gilthead sea bream (Sparus aurata): applicability in population genetics and pedigree analysis. Aquacult Res 41:1514–1522
Rossi AR, Perrone E, Sola L (2006) Genetic structure of gilthead sea bream Sparus aurata, in the Central Mediterranean Sea. Cent Eur J Biol 1:636–647
Sarropoulou E, Franch R, Louro B, Power DM, Bargelloni L, Magoulas A, Senger F, Tsalavouta M, Patarnello T, Galibert F, Kotoulas G, Geisler R (2007) A gene-based radiation hybrid map of the gilthead sea bream Sparus aurata refines and exploits conserved synteny with Tetraodon nigroviridis. BMC Genom 8:44
Stockley BM, Rogers AD, Iyengar A, Menezes G, Santos R, Long A (2000) Ten microsatellite loci isolated and developed for the black spot sea bream, Pagellus bogaraveo (Brunnich, 1768). Mol Ecol 9:999–1000
Taggart JB (2007) FAP: an exclusion-based parental assignment program with enhanced predictive functions. Mol Ecol 7:412–415
Vandeputte M (2012) An accurate formula to calculate exclusion power of marker sets in parentage assignment. Genet Sel Evolut 44:36. doi:10.1186/1297-9686-44-36
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Fernandes, T., Herlin, M., Belluga, M.D.L. et al. Estimation of genetic parameters for growth traits in a hatchery population of gilthead sea bream (Sparus aurata L.). Aquacult Int 25, 499–514 (2017). https://doi.org/10.1007/s10499-016-0046-5
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s10499-016-0046-5