Skip to main content
Log in

Soil properties and not high CO2 affect CH4 production and uptake in periodically waterlogged arable soils

  • Soils, Sec 1 • Soil Organic Matter Dynamics and Nutrient Cycling • Research Article
  • Published:
Journal of Soils and Sediments Aims and scope Submit manuscript

Abstract

Purpose

Several studies related to CH4 cycling focus on the effect of elevated atmospheric CO2 levels on soil methanogenesis and methanotrophy. However, periodically waterlogged soils are characterized by much higher CO2 concentrations, while aggregates forming in arable soils due to traditional cultivation may be a natural CH4 source for low-affinity methanotrophs. We present a comprehensive laboratory investigation into both methanogenesis and methanotrophy in three different soils under ambient and high CO2 concentrations.

Materials and methods

The tested materials were agricultural soils widely distributed in Europe: Eutric Cambisol, Haplic Podzol and Mollic Gleysol with determined properties: Corg, Ntot, clay, silt, sand, pH, NO3, NH4+. We conducted two independent experiments on methanogenesis (flooded conditions) and methanotrophy (non-flooded conditions). All samples for both studies were divided into three sets which differed in the initial CO2 concentration in headspace: ambient CO2 (0.03% v/v ± 0.005), and two high CO2 levels (5% ± 0.4 and 10% ± 0.5 v/v CO2). Moreover, 1% (v/v) of CH4 was added to all sets prepared for the methanotrophy test since low-affinity methanotrophy in the tested soils had been reported previously. Gas concentrations (CH4, CO2, O2) in headspace were measured using gas chromatography method.

Results and discussion

We observed that the examined soils differed in their ability to produce CH4 as follows: Haplic Podzol = Eutric Cambisol > Mollic Gleysol, as well as to consume CH4: Mollic Gleysol > Haplic Podzol > Eutric Cambisol. The CH4 emissions started faster in Gleysol, but the final CH4 concentration and CH4 production rate in this soil were significantly lower than in the two other soils. The CH4 uptake rate significantly differed among the tested soils. The MANOVA confirmed the significance of the soil-type factor in determining both process rates, whereas the effect of CO2 level and the interaction between both factors were not significant. The amount of consumed O2 during CH4 oxidation was also characteristic for examined soil, but did not differ significantly between CO2 variants.

Conclusions

CH4 production and consumption in three different soils (Eutric Cambisol, Haplic Podzol and Mollic Gleysol) collected from periodically waterlogged arable fields were more strongly affected by soil properties than by high CO2 concentration. In contrast, the high CO2 level significantly decreased CO2 production accompanying tested the CH4-related processes.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4

Similar content being viewed by others

References

  • Alden L, Demoling F, Bååth E (2001) Rapid method of determining factors limiting bacterial growth in soil. Appl Environ Microbiol 67:1830–1838

    CAS  Google Scholar 

  • Bender M, Conrad R (1994) Methane oxidation activity in various soils and freshwater sediments: occurrence, characteristics, vertical profiles, and distribution on grain size fractions. J Geophys Res 99:16531–16540

    CAS  Google Scholar 

  • Bieganowski A, Ryżak M, Sochan A, Makó A, Barna G, Hernádi H, Beczek M, Polakowski C (2018) Laser diffractometry in the measurements of soil and sediment particle size distribution. Adv Agron 151:215–279

  • Blankinship JC, Brown JR, Dijkstra P, Hungate BA (2010) Effects of interactive global changes on methane uptake in an annual grassland. J Geophys Res 115:G02008

    Google Scholar 

  • Boeckx P, Van Cleemput O, Villaralvo I (1997) Methane oxidation in soils with different textures and land use. Nutr Cyclin Agroecosys 49:91–95

    CAS  Google Scholar 

  • Boucher O, Friedlingstein P, Collins B, Shine KP (2009) The indirect global warming potential and global temperature change potential due to methane oxidation. Environ Res Lett 4:044007

    Google Scholar 

  • Chan ASK, Parkin TB (2001) Methane oxidation and production activity in soils from natural and agricultural ecosystems. J Environ Qual 30:1896–1903

    CAS  Google Scholar 

  • Das S, Adhya T (2012) Dynamics of methanogenesis and methanotrophy in tropical paddy soils as influenced by elevated CO2 and temperature interaction. Soil Biol Biochem 47:36–45

    CAS  Google Scholar 

  • Dijkstra FA, Morgan JA, LeCain DR, Follett RF (2010) Microbially mediated CH4 consumption and N2O emission is affected by elevated CO2, soil water content, and composition of semi-arid grassland species. Plant Soil 329:269–281

    CAS  Google Scholar 

  • Dijkstra FA, Morgan JA, von Fischer JC, Follett RF (2011) Elevated CO2 and warming effects on CH4 uptake in a semiarid grassland below optimum soil moisture. J Geophys Res 116:G01007. https://doi.org/10.1029/2010JG001288

    Article  CAS  Google Scholar 

  • Ebrahimi A, Or D (2018) Dynamics of soil biogeochemical gas emissions shaped by remolded aggregate sizes and carbon configurations under hydration cycles. Glob Chang Biol 24:e378–e392

    Google Scholar 

  • Elberling B (2003) Seasonal trends of soil CO2 dynamics in a soil subject to freezing. J Hydrol 276:159–175

    CAS  Google Scholar 

  • Fronzek S, Pirttioja N, Carter TR et al (2018) Classifying multi-model wheat yield impact response surfaces showing sensitivity to temperature and precipitation change. Agric Syst 159:209–224

    Google Scholar 

  • Frouz J, Bujalský L (2018) Flow of CO2 from soil may not correspond with CO2 concentration in soil. Sci Rep 8:10099

    Google Scholar 

  • Fuhrer J, Beniston M, Fischlin A, Frei C, Goyette S, Jasper K, Pfister C (2006) Climate risks and their impact on agriculture and forests in Switzerland. Climate Change 79:79–102

    CAS  Google Scholar 

  • Giltrap DL, Li C, Saggar S (2010) DNDC: a process-based model of greenhouse gas fluxes from agricultural soils. Agric Ecosyst Environ 136:292–300

    CAS  Google Scholar 

  • Joulian C, Escoffier S, Le Mer J, Neue HU, Roger PA (1997) Populations and potential activities of methanogens and methanotrophs in rice fields: relations with soil properties. Eur J Soil Biol 33:105–116

    Google Scholar 

  • Kao-Kniffi J, Freyre DS, Balser TC (2011) Increased methane emissions from an invasive wetland plant under elevated carbon dioxide levels. Appl Soil Ecol 48:309–312

    Google Scholar 

  • Kou Y, Li J, Wang Y, Li C, Tu B, Yao M, Li X (2017) Scale-dependent key drivers controlling methane oxidation potential in Chinese grassland soils. Soil Biol Biochem 111:104–114

    CAS  Google Scholar 

  • Kravchenko I, Sukhacheva M (2017) Methane oxidation and diversity of aerobic methanotrophs in forest and agricultural soddy-podzolic soils. Appl Soil Ecol 119:267–274

    Google Scholar 

  • Kuzyakov Y, Horwath WR, Dorodnikov M, Blagodatskaya E (2019) Review and synthesis of the effects of elevated atmospheric CO2 on soil processes: no changes in pools, but increased fluxes and accelerated cycles. Soil Biol Biochem 128:66–78

    CAS  Google Scholar 

  • Kvenvolden KA, Rogers BW (2005) Gaia’s breath – global methane exhalations. Mar Pet Geol 22:579–590

    CAS  Google Scholar 

  • Le Mer J, Roger P (2001) Production, oxidation, emission and consumption of methane by soils: a review. Eur J Soil Biol 37:25–50

    Google Scholar 

  • Li J, Li Y, Yang X, Zhang J, Lin Z, Zhao B (2015) Microbial community structure and functional metabolic diversity are associated with organic carbon availability in an agricultural soil. J Integr Agric 14:2500–2511

    CAS  Google Scholar 

  • Liu Y, Dong Y, Wang P, Hussain Q, Ge T, Wang J (2019) Distribution of methane production and methanogenic archaeal community structure across soil particle size fractions along a rice chronosequence. J Soil Water Conserv 74:235–246

    Google Scholar 

  • Mangalassery S, Sjögersten S, Sparkes DL, Sturrock CJ, Mooney SJ (2013) The effect of soil aggregate size on pore structure and its consequence on emission of greenhouse gases. Soil Tillage Res 132:39–46

    Google Scholar 

  • McLain JET, Ahmann DM (2008) Increased moisture and methanogenesis contribute to reduced methane oxidation in elevated CO2 soils. Biol Fertil Soils 44:623–631

    CAS  Google Scholar 

  • Megonigal JP, Hines ME, Visscher PT (2004) Anaerobic metabolism: linkages to trace gases and aerobic processes. In: Schlesinger WH (ed) Biogeochemistry. Elsevier-Pergamon, Oxford, pp 317–424

    Google Scholar 

  • Min H, Chen ZY, Wu WX, Chen MC (2002) Microbial aerobic oxidation of methane in paddy soil. Nutr Cyclin Agroecosys 64:79–85

    CAS  Google Scholar 

  • Mohanty SR, Tiwari S, Dubey G, Ahirwar U, Kollah B (2016) How methane feedback response influence redox processes in a tropical vertisol. Biol Fertil Soils 52:479–490

    CAS  Google Scholar 

  • Oh N-H, Kim H-S, Richter DD Jr (2005) What regulates soil CO2 concentrations? A modeling approach to CO2 diffusion in deep soil profiles. Environ Eng Sci 22:38–45

    CAS  Google Scholar 

  • Reeves SH, Somasundaram J, Wang WJ, Heenan MA, Finn D, Dalal RC (2019) Effect of soil aggregate size and long-term contrasting tillage, stubble and nitrogen management regimes on CO2 fluxes from a vertisol. Geoderma 337:1086–1096

    CAS  Google Scholar 

  • Rigler E, Zechmeister-Boltenstern S (1999) Oxidation of ethylene and methane in forest soils - effect of CO2 and mineral nitrogen. Geoderma 90:147–159

    CAS  Google Scholar 

  • Risk D, Kellman L, Beltrami H (2002) Carbon dioxide in soil profiles: production and temperature dependence. Geophys Res Lett 29:6

    Google Scholar 

  • Rodríguez A, Ruiz-Ramos M, Palosuo T, Carter TR, Fronzek S, Lorite IJ, Ferrise R, Pirttioja N, Bindi M, Baranowski P, Buis S, Cammarano D, Chen Y, Dumont B, Ewert F, Gaiser T, Hlavinka P, Hoffmann H, Höhn JG, Jurecka F, Kersebaum KC, Krzyszczak J, Lana M, Mechiche-Alami A, Minet J, Montesino M, Nendel C, Porter JR, Ruget F, Semenov MA, Steinmetz Z, Stratonovitch P, Supit I, Tao F, Trnka M, de Wit A, Rötter RP (2019) Implications of crop model ensemble size and composition for estimates of adaptation effects and agreement of recommendations. Agric For Meteorol 264:351–362

    Google Scholar 

  • Röwer IU, Geck C, Gebert J, Pfeiffer EM (2011) Spatial variability of soil gas concentration and methane oxidation capacity in landfill covers. Waste Manag 31:926–934

    Google Scholar 

  • Sabrekov AF, Glagolev MV, Alekseychik PK, Smolentsev BA, Terentieva IE, Krivenok LA, Maksyutov SS (2016) A process-based model of methane consumption by upland soils. Environ Res Lett 11:075001

    Google Scholar 

  • Schnell S, King GM (1995) Stability of methane oxidation capacity to variations in methane and nutrient concentrations. FEMS Microbiol Ecol 17:285–294

    CAS  Google Scholar 

  • Smith KE, Runion GB, Prior SA, Rogers HH, Torbert HA (2010) Effects of elevated CO2 and agricultural management on flux of greenhouse gases from soil. Soil Sci 175:349–356

    CAS  Google Scholar 

  • Stępniewski W, Stępniewska Z, Bennicelli RP, Gliński J (2005) Oxygenology in outline. Institute of Agrophysics, Polish Academy of Sciences, Lublin

    Google Scholar 

  • Strong PJ, Xie S, Clarke WP (2015) Methane as a resource: can the methanotrophs add value? Environ Sci Technol 49:4001–4018

    CAS  Google Scholar 

  • Sun J, Xia Z, He T, Dai W, Peng B, Liu J, Jiang P, Han S, Bai E (2017) Ten years of elevated CO2 affects soil greenhouse gas fluxes in an open top chamber experiment. Plant Soil 420:435–450

    CAS  Google Scholar 

  • Szafranek-Nakonieczna A, Wolińska A, Zielenkiewicz U, Kowalczyk A, Stępniewska Z, Błaszczyk M (2019) Activity and identification of methanotrophic bacteria in arable and no-tillage soils from Lublin region (Poland). Microb Ecol 77:701–712

    CAS  Google Scholar 

  • Tiwari S, Singh C, Shankar J (2018) Land use changes: a key ecological driver regulating methanotrophs abundance in upland soils. Energ Ecol Environ 3:355–371

    Google Scholar 

  • Trotsenko YA, Murrell JC (2008) Metabolic aspects of aerobic obligate methanotrophy. Adv Appl Microbiol 63:183–229

    CAS  Google Scholar 

  • van der Sluis T, Pedroli B, Kristensen SBP, Cosor GL, Pavlis E (2016) Changing land use intensity in Europe–recent processes in selected case studies. Land Use Policy 57:777–785

    Google Scholar 

  • van Groenigen KJ, Osenberg CW, Hungate BA (2011) Increased soil emissions of potent greenhouse gases under increased atmospheric CO2. Nature 475:214–216

    Google Scholar 

  • Várallyay G (2010) The impact of climate change on soils and on their water management. Agron Res 8(Special Issue II):385–396

    Google Scholar 

  • Vodnik D, Videmšek U, Pintar M, Maček I, Pfanz H (2009) The characteristics of soil CO2 fluxes at a site with natural CO2 enrichment. Geoderma 150:32–37

    CAS  Google Scholar 

  • Walczak R, Ostrowski J, Witkowska-Walczak B, Sławiński C (2002) Spatial characteristic of hydro-physical properties in arable mineral soils in Poland as illustrated by field water capacity (FWC). Int Agrophys 16:151–159

    Google Scholar 

  • Walkiewicz A, Brzezińska M (2019) Interactive effects of nitrate and oxygen on methane oxidation in three different soils. Soil Biol Biochem 133:116–118

    CAS  Google Scholar 

  • Walkiewicz A, Bulak P, Brzezińska M, Włodarczyk T, Polakowski C (2012) Kinetics of methane oxidation in selected mineral soils. Int Agrophys 26:401–406

    CAS  Google Scholar 

  • Walkiewicz A, Brzezińska M, Bieganowski A (2018) Methanotrophs are favored under hypoxia in ammonium-fertilized soils. Biol Fertil Soils 54:861–870

    Google Scholar 

  • Wang C, Jin Y, Ji C, Zhang N, Song M, Kong D, Liu S, Zhang X, Liu X, Zou J, Li S, Pan G (2018) An additive effect of elevated atmospheric CO2 and rising temperature on methane emissions related to methanogenic community in rice paddies. Agric Ecosyst Environ 257:165–174

    CAS  Google Scholar 

  • Welles JM, Demetriades-Shah TH, McDermitt DK (2001) Considerations for measuring ground CO2 effluxes with chambers. Chem Geol 177:3–13

    CAS  Google Scholar 

  • Wnuk E, Walkiewicz A, Bieganowski A (2017) Methane oxidation in lead-contaminated mineral soils under different moisture levels. Environ Sci Pollut Res 24:25346–25354

    CAS  Google Scholar 

  • Xu X, Yuan F, Hanson PJ, Wullschleger SD, Thornton PE, Riley WJ, Song X, Graham DE, Song C, Tian X (2016) Reviews and syntheses: four decades of modeling methane cycling in terrestrial ecosystems. Biogeosciences 13:3735–3755

    CAS  Google Scholar 

  • Yu Y, Zhao C, Jia H, Niu B, Sheng Y, Shi F (2017) Effects of nitrogen fertilizer, soil temperature and moisture on the soil-surface CO2 efflux and production in an oasis cotton field in arid northwestern China. Geoderma 308:93–103

    CAS  Google Scholar 

  • Yu H, He Z, Wang A, Xie J, Wu L, Van Nostrand JD, Jin D, Shao Z, Schadt CW, Zhou J, Deng Y (2018) Divergent responses of forest soil microbial communities under elevated CO2 in different depths of upper soil layers. Appl Environ Microbiol 84:e01694–e01617

    Google Scholar 

  • Zeng L, Tian J, Chen H, Wu N, Yan Z, Du L, Shen Y, Wang X (2019) Changes in methane oxidation ability and methanotrophic community composition across different climatic zones. J Soils Sediments 19:533–543

    CAS  Google Scholar 

  • Zhang Y, Ma A, Zhuang G, Zhuang X (2019) The acetotrophic pathway dominates methane production in Zoige alpine wetland coexisting with hydrogenotrophic pathway. Sci Rep 9:9141

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Anna Walkiewicz.

Ethics declarations

Conflict of interest

The authors declare that they have no conflict of interest.

Additional information

Responsible editor: Weixin Ding

Publisher’s note

Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Walkiewicz, A., Brzezińska, M., Wnuk, E. et al. Soil properties and not high CO2 affect CH4 production and uptake in periodically waterlogged arable soils. J Soils Sediments 20, 1231–1240 (2020). https://doi.org/10.1007/s11368-019-02525-x

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s11368-019-02525-x

Keywords

Navigation