Abstract
The use of non-potable water (such as seawater) is an attractive alternative for water intensive processes such as biomass pretreatment and saccharification steps in the production of biochemicals and biofuels. Identification and application of halotolerant enzymes compatible with high-salt conditions may reduce the energy needed for non-potable water treatment and decrease waste treatment costs. Here we present the biochemical properties of a halotolerant endo-1,4-β-xylanase produced by Aspergillus clavatus in submerged fermentation, using paper sludge (XPS) and sugarcane bagasse (XSCB), and its potential application in the hydrolysis of agroindustrial residues. The peptide mass fingerprint and amino acid sequencing of the XPS and XSCB enzymes showed primary structure similarities with an endo-1,4-β-xylanase from Aspergillus clavatus (XYNA_ASPCL). Both enzyme preparations presented good thermal stability at 50 °C and were stable over a wide range of pH and Vmax up to 2450 U/mg for XPS. XPS and XSCB were almost fully stable even after 24 h of incubation in the presence of up to 3 M NaCl, and their activity were not affected by 500 mM NaCl. Both enzyme preparations were capable of hydrolyzing paper sludge and sugarcane bagasse to release reducing sugars. These characteristics make this xylanase attractive to be used in the hydrolysis of biomass, particularly with brackish water or seawater.
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References
Kulkarni, N., Shendye, A., & Rao, M. (1999). Molecular and biotechnological aspects of xylanases. FEMS Microbiology Reviews, 23(4), 411–456.
Collins, T., Gerday, C., & Feller, G. (2005). Xylanases, xylanase families and extremophilic xylanases. FEMS Microbiology Reviews, 29(1), 3–23.
Ahmed, S., Riaz, S., & Jamil, A. (2009). Molecular cloning of fungal xylanases: an overview. Applied Microbiology and Biotechnology, 84, 19–35.
Li, Z., Li, X., Liu, T., Chen, S., Liu, H., Wang, H., Li, K., Song, Y., Luo, X., Zhao, J., & Zhang, T. (2019). The critical roles of exposed surface residues for the thermostability and halotolerance of a novel GH11 xylanase from the metagenomic library of a saline-alkaline soil. International Journal of Biological Macromolecules, 133, 316–323.
Carli, S., Meleiro, L. P., Rosa, J. C., Moraes, L. A. B., Jorge, J. A., Masui, D. C., & Furriel, R. P. M. (2016). A novel thermostable and halotolerant xylanase from Colletotrichum graminicola. Journal of Molecular Catalysis B: Enzymatic, 133, S508–S517.
Garg, R., Srivastava, R., Brahma, V., Verma, L., Karthikeyan, S., & Sahni, G. (2016). Biochemical and structural characterization of a novel halotolerant cellulase from soil metagenome. Scientific Reports, 6, 39634.
Adigüzel, A. O., & Tunçer, M. (2016). Production, characterization and application of a xylanase from Streptomyces sp. AOA40 in fruit juice and bakery industries. Food Biotechnology, 30, 189–218.
Pasin, T. M., Lucas, R. C., Scarcella, A. S. A., Silva, Y. H., Betini, J. H. A., Jorge, J. A., & Polizeli, M. L. T. M. (2017). Production of lignocellulolytic enzymes in paper sludge by different Aspergillus. Revista C. T. A, 6, 412–418.
Barratt, R. W., Johnson, G. B., & Ogata, W. N. (1965). Wild-type and mutant stocks of Aspergillus nidulans. Genetics, 52(1), 233–246.
Gurram, R. N., Al-Shannag, M., Lecher, N. J., Duncan, S. M., Singsass, E. L., & Alkasrawi, M. (2015). Bioconversion of paper mill sludge to bioethanol in the presence of accelerants or hydrogen peroxide pretreatment. Bioresource Technology, 192, 529–539.
Vogel, H. F. (1964). Distribution of lysine pathway among fungi: evolutionary implications. The American Naturalist, 98, 435–446.
Pasin, T. M., Benassi, V. M., Heinen, P. R., Damasio, A. R. L., Cereia, M., Jorge, J. A., & Polizeli, M. L. T. M. (2017). Purification and functional properties of a novel glucoamylase activated by manganese and lead produced by Aspergillus japonicus. International Journal of Biological Macromolecules, 102, 779–788.
Bradford, M. M. (1976). A rapid and sensitive for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Analytical Biochemistry, 72, 248–254.
Miller, G. L. (1959). Use of dinitrosalicylic acid reagent for determination of reducing sugar. Analytical Chemistry, 31, 426–428.
Laemmli, U. K. (1970). Cleavage of structural proteins during assembly of the head of bacteriophage T4. Nature, 227(5259), 680–685.
Haider, S. R., Reid, H. J., & Sharp, B. L. (2012). Tricine-SDS-PAGE. Methods in Molecular Biology, 869, 81–91.
Castro, L. D. S., Pedersoli, W. R., Antoniêto, A. C. C., Steindorff, A. S., Silva-Rocha, R., Martinez-Rossi, N. M., Rossi, A., Brown, N. A., Goldman, G. H., Faça, V. M., Persinoti, G. F., & Silva, R. N. (2014). Comparative metabolism of cellulose, sophorose and glucose in Trichoderma reesei using high-throughput genomic and proteomic analyses. Biotechnology for Biofuels, 7, 41.
Camacho, C., Coulouris, G., Avagyan, V., Ma, N., Papadopoulos, J., Bealer, K., & Madden, T. L. (2009). BLAST+: architecture and applications. BMC Bioinformatics, 10, 421–430.
Remmert, M., Biegert, A., Hauser, A., & Soding, J. (2012). HHblits: lightning-fast interative protein sequence searching by HMM-HMM alignment. Nature Methods, 9, 173–175.
Vriend, G. (1990). WHAT IF: a molecular modeling and drug design program. Journal of Molecular Graphics, 8, 52–56.
Benkert, P., Künzli, M., & Schwede, T. (2009). QMEAN server for protein model quality estimation. Nucleic Acids, 37, 510–514.
Wallner, B., & Elofsson, A. (2003). Can correct protein models be identified? Protein Science, 12(5), 1073–1086.
Michaelis, L., & Menten, M. L. (1913). Die Kinetik der Investinwirkung. Biochemische Zeitschrift, 49, 333.
Dubois, M., Gilles, K. A., Hamilton, J. K., Rebers, P. A., & Smith, F. (1956). Colorimetric method for determination of sugars and related substances. Analytical Chemistry, 28, 350–356.
Bhardwaj, N., Kumar, B., Agarwal, K., Chaturvedi, V., & Verma, P. (2018). Purification and characterization of a thermo-acid/alkali stable xylanases from Aspergillus oryzae LC1 and its application in xylo-oligosaccharides production from lignocellulosic agricultural wastes. International Journal of Biological Macromolecules, 122, 1191–1202.
Heinen, P. R., Bauermeister, A., Ribeiro, L. F., Messias, J. M., Almeida, P. Z., Moraes, L. A. B., Vargas-Rechia, C. G., de Oliveira, A. H. C., Ward, R. J., Filho, E. X. F., Kadowaki, M. K., Jorge, J. A., & Polizeli, M. L. T. M. (2018). GH11 xylanase from Aspergillus tamarii Kita: purification by one-step chromatography and xylooligosaccharides hydrolysis monitored in real-time by mass spectrometry. International Journal of Biological Macromolecules, 108, 291–299.
Singh, A., Sharma, D., Varghese, L. M., Mahajan, R. (2019). Fast flow rate processes for purification of alkaline xylanase isoforms from Bacillus pumilus AJK and their biochemical characterization for industrial application purposes. Biotechnology Progress, e2898, 1–12.
Suleman, M., Bukhari, I. H., Aujla, M. I., Faiz, A. H. (2016). Production and characterization of xylanase from Aspergillus niger using wheat bran, corn cobsand sugar cane bagasse as carbon sources with different concentrations. Journal of Bioresource Management, 3(1), 1–10.
Li, C., Li, J., Wang, R., Li, X., Li, J., Deng, C., & Wu, M. (2018). Substituting both the N-terminal and “Cord” regions of a xylanase from Aspergillus oryzae to improve its temperature characteristics. Applied Biochemistry and Biotechnology, 185(4), 1044–1059.
Sharma, S., Sharma, V., Nargotra, P., & Bajaj, B. K. (2018). Process desired functional attributes of an endoxylanase of GH10 family from a new strain of Aspergillus terreus S9. International Journal of Biological Macromolecules, 115, 663–671.
Zhang, H. M., Wang, J. Q., Wu, M. C., Gao, S. J., Li, J. F., & Yang, Y. J. (2014). Optimized expression, purification and characterization of a family 11 xylanase (AuXyn11A) from Aspergillus usamii E001 in Pichia pastoris. Journal of the Science of Food and Agriculture, 94(4), 699–706.
Shariq, M., and Sohail, M. (2019). Application of Candida tropicalis MK-160 for the production of xylanase and ethanol. Journal of King Saud University - Science, 31(4), 1189–1194.
Cunha, C. C. Q. B., Gama, A. R., Cintra, L. C., Bataus, L. A. M., & Ulhoa, C. J. (2018). Improvement of bread making quality by supplementation with a recombinant xylanase produced by Pichia pastoris. PLoS One, 13, e0192996.
Karan, R., Capes, M. D., & DasSarma, S. (2012). Function and biotechnology of extremophilic enzymes in low water activity. AquaticBiosystems, 8, 4.
Wu, J., Qiu, C., Ren, Y., Yan, R., Ye, X., & Wang, G. (2018). Novel salt-tolerant xylanase from a mangrove-isolated fungus Phoma sp. MF13 and its application in Chinese steamed bread. ACS Omega, 3(4), 3708–3716.
Wang, H., Li, Z., Liu, H., Li, S., Qiu, H., Li, K., Luo, X., Song, Y., Wang, N., He, H., Zhou, H., Ma, W., & Zhang, T. (2017). Heterologous expression in Pichia pastoris and characterization of a novel GH11 xylanase from saline-alkali soil with excellent tolerance to high pH, high salt concentrations and ethanol. Protein Expression and Purification, 139, 71–77.
Knob, A., & Carmona, E. C. (2010). Purification and characterization of two extracellular xylanases from Penicillium sclerotiorum: a novel acidophilic xylanase. Applied Biochemistry and Biotechnology, 162(2), 429–443.
Michelin, M., Silva, T. M., Jorge, J. A., & Polizeli, M. L. T. M. (2014). Purification and biochemical properties of multiple xylanases from Aspergillus ochraceus tolerant to Hg2+ ion and a wide range of pH. Applied Biochemistry and Biotechnology, 174(1), 206–220.
Coutinho, P. M., & Reilly, P. J. (1997). Glucoamylase structural, functional and evolutionary relationships. Proteins: Structure, Function, and Genetics, 29, 334–347.
Astolfi, V., Astolfi, A. L., Mazutti, M. A., Rigo, E., Di Luccio, M., Camargo, A. F., Dalastra, C., Kubeneck, S., Fongaro, G., & Treichel, H. (2019). Cellulolytic enzyme production from agricultural residues for biofuel purpose on circular economy approach. Bioprocess and Biosystems Engineering, 42(5), 677–685.
Scarcella, A. S. A. (2016). Hydrolysis and fermentation of cellulosic residues aiming the ethanol production (in Portuguese). Master thesis, University of São Paulo, Brazil. 157.
Chandel, A. K., Antunes, F. A., Anjos, V., Bell, M. J., Rodrigues, L. N., Polikarpov, I., Azevedo, E. R., Bernardinelli, O. D., Rosa, C. A., Pagnocca, F. C., & da Silva, S. S. (2014). Multi-scale structural and chemical analysis of sugarcane bagasse in the process of sequential acid–base pretreatment and ethanol production by Scheffersomyces shehatae and Saccharomyces cerevisiae. Biotechnology for Biofuels, 7, 63.
Kurrataa'Yun, Yopi, & Meryandini, A. (2015). Characterization of Xylanase activity produced by Paenibacillus sp. XJ18 from TNBD Jambi, Indonesia. HAYATI Journal of Biosciences, 22, 20–26.
Juturu, V., & Wu, J. C. (2012). Microbial xylanases: engineering, production and industrial applications. Biotechnology Advances, 30(6), 1219–1227.
Acknowledgments
We thank Fabio M. Squina from Universidade de Sorocaba, Brazil, for providing the A. clavatus NRRL1 strain, Mauricio de Oliveira for technical assistance and Jorge H. A. Betini for providing the paper sludge samples.
Funding
This work was supported by grants from Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)/Brasil-financing Code 001 and Programa de Doutorado Sanduíche no Exterior (PDSE/CAPES no. 88881.186934/2018-01), Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)-Process numbers 2010/52322-3, 2014/50884-5 and Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq, process 563260/2010-6), and the National Institute of Science and Technology of the Bioethanol (465319/2014-9). T.M.P. was recipient of CAPES/PDSE Fellowship and J.C.S.S., A.S.A.S., and R.C.L. were recipients of CAPES Fellowship; T.B.O. is recipient of FAPESP Fellowship (process 2017/09000-4); and J.C.R., R.J.W., M.S.B., and M.L.T.M.P. (process 301963/2017–7) are Research Fellows of CNPq.
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Pasin, T.M., Salgado, J.C.S., Scarcella, A.S.d.A. et al. A Halotolerant Endo-1,4-β-Xylanase from Aspergillus clavatus with Potential Application for Agroindustrial Residues Saccharification. Appl Biochem Biotechnol 191, 1111–1126 (2020). https://doi.org/10.1007/s12010-020-03232-x
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DOI: https://doi.org/10.1007/s12010-020-03232-x