Abstract
Image segmentation plays a vital role in medical image processing for the delineation of anatomical organs and analysis of anomalies. The evaluation of segmentation algorithms is vital to select the appropriate algorithm and parameters for optimum performance. In this paper, we are describing various metrics for evaluating the quality of segmentation algorithms with respect to ground truth images. The analysis of metrics has been carried out on real-time data sets of abdomen and retina. The variants of active contour algorithms are employed for the abdomen CT images, Kirsch and Wavelet algorithm were used for the retinal fundus images. This paper presents performance evaluation parameters that can be used to analyze efficiency of segmentation algorithms.
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References
Zhang, Hui, Fritts, Jason E., Goldman, Sally A.: Image segmentation evaluation: a survey of unsupervised methods. Comput. Vis. Image Underst. 110(2), 260–280 (2008)
Suri, J.S., Wilson, D., Laxminarayan, S.: Handbook of Biomedical Image Analysis, vol. 2. Springer Science & Business Media, Berlin, Germany (2005)
Ilea, D.E., Whelan, P.F., Ghita, O.: Unsupervised image segmentation based on the multi-resolution integration of adaptive local texture descriptors. In: Proceedings of the Fifth International Conference on Computer Vision Theory and Applications, vol. 2 (2010)
Pham, D.L., Xu, C., Prince, J.L.: Current methods in medical image segmentation. Annu. Rev. Biomed. Eng. 2, 1–754 (2000)
Tian, W., Geng, Y., Liu, J. and Ai, L.: Optimal parameter algorithm for image segmentation. In: Second International Conference on Future Information Technology and Management Engineering (2009)
Chalana, V., Kim, Y.: A methodology for evaluation of boundary detection algorithms on medical images. IEEE Trans. Med. Imag. 16(5), 642–652 (1997)
Russakoff, D.B., Tomasi, C., Rohlfing, T., Maurer, C.R. Jr.: Image similarity using mutual information of regions. In: European Conference on Computer Vision, pp. 596–607 (2004)
Cardoso, J.S., Corte-Real, L.: Toward a generic evaluation of image segmentation. IEEE Trans. Image Process. 14(11), 1773–1782 (2005)
Fenster, A., Chiu, B.: Evaluation of segmentation algorithms for medical imaging. In: IEEE Proceedings of the Engineering in Medicine and Biology, pp. 7186–7189 (2005)
Cárdenes, R. et al.: Multimodal evaluation for medical image segmentation. In: Kropatsch, W.G., Kampel, M., Hanbury, A. (eds.) Computer Analysis of Images and Patterns. CAIP 2007, Lecture Notes in Computer Science, vol. 4673. Springer, Berlin, Heidelberg (2007)
Monteiro F.C., Campilho A.C.: Performance evaluation of image segmentation. In: Campilho, A., Kamel, M.S. (eds.) Image Analysis and Recognition, ICIAR 2006, Lecture Notes in Computer Science, vol 4141. Springer, Berlin, Heidelberg (2006)
Withey, D.J., Koles, Z.J.: Medical image segmentation: methods and software. IEEE Proc. NFSI ICFBI 2007, 140–143 (2007)
Babalola, K.O., Patenaude, B., Aljabar, P., Schnabel, J., Kennedy, D., Crum, W., Smith, S., Cootes, T., Jenkinson, M., Rueckert, D.: An evaluation of four automatic methods of segmenting the subcortical structures in the brain. Neuro Image 47, 1435–1447 (2009)
Li, X., Aldridge, B., Rees, J., Fisher, R.: Estimating the ground truth from multiple individual segmentations with application to skin lesion segmentation. In: Proceedings of the Medical Image Understanding and Analysis Conference, UK, vol. 1, pp. 101–106 (2010)
Kohlberger, T., Singh V., Alvino C., Bahlmann C., Grady L.: Evaluating segmentation error without ground truth. In: Ayache, N., Delingette, H., Golland, P., Mori, K. (eds.) Medical Image Computing and Computer-Assisted Intervention—MICCAI 2012. MICCAI 2012, Lecture Notes in Computer Science, vol. 7510. Springer, Berlin, Heidelberg (2012)
Safarzadeh Khooshabi, G.: Segmentation Validation Framework, CMIV, Linköping University, Department of Biomedical Engineering (2013)
Agrawal, R., Sharma, M.: Review of segmentation methods for brain tissue with magnetic resonance images. Int. J. Comput. Netw. Inf. Secur. 6(4), 55 (2014)
Khan, Z.F., Kannan, A.: Intelligent segmentation of medical images using fuzzy bitplane thresholding. Meas. Sci. Rev. 14(2), 94–101 (2014)
Taha, A.A., Hanbury, A., Del Toro, O.A.J.: A formal method for selecting evaluation metrics for image segmentation. In: IEEE ICIP, pp.932–936 (2014)
Ahirwar, A.: Study of techniques used for medical image segmentation and computation of statistical test for region classification of brain MRI. I. J. Inf. Technol. Comput. Sci. 05, 44–53 (2013)
Gajanayake, G.M.N.R., Yapa, R.D., Hewawithana, B.: Comparison of standard image segmentation methods for segmentation of brain tumors from 2D MR images. IEEE International Conference on Industrial and Information Systems, pp. 301–305 (2009)
Sinthanayothin, C., Boyce, J.F., Williamson, T.H., Cook, H.L., Mensah, E., Lal, S., Usher, D.: Automated detection of diabetic retinopathy on digital fundus images. Diabet. Med. 19(2), 105–112 (2002)
Wang, Z., Bovik, A.C., Sheikh, H.R., Simoncelli, E.P.: Image quality assessment: from error visibility to structural similarity. IEEE Trans. Image Process. 13(4), 600–612 (2004)
Hamamci, A., Kucuk, N., Karaman, K., Engin, K., Unal, G.: Tumor-cut: segmentation of brain tumors on contrast enhanced MR images for radiosurgery applications. IEEE Trans. Med. Imaging 31(3), 790–804 (2012)
Coelho, L.P., Shariff, A., Murphy, R.F.: Nuclear segmentation in microscope cell images: a hand-segmented dataset and comparison of algorithms. In: Proceedings of the IEEE International Symposium on Biomed Imaging, vol. 5193098, pp. 518–521 (2009)
Xess, M., Agnes, S.A.: Analysis of image segmentation methods based on performance evaluation parameters. Int. J. Comput. Eng. Res. 4(3), 68–75 (2014)
Chen, S., Ma, B., Zhang, K.: On the similarity metric and the distance metric. Theor. Comput. Sci. 410(24–25), 2365–2376 (2009)
Zhang, Y., Huang, D., Ji, M., Xie, F.: Image segmentation using PSO and PCM with Mahalanobis distance. Expert Syst. Appl. 38(7), 9036–9040 (2011)
Kumar, S.N, Lenin Fred, A., Ajay Kumar, H., Jonisha Miriam, L.R., Asha, M.R.: Retinal blood vessel extraction using wavelet transform and morphological operations. Res. J. Pharm. Biol. Chem. Sci. 7(5) (2016)
Kumar, S.N., Fred, A.L., Kumari, L.S., Varghese, P.S.: Localized region based active contour algorithm for segmentation of abdominal organs and tumors in computer tomography images. Asian J. Inf. Technol. 15(23), 4783–4789 (2016)
Kumar, S.N., Fred, A.L., Kumari, S.L., Anchalo Bensiger, S.M.: Feed forward neural network based automatic detection of liver in computer tomography images. Int. J. PharmTech Res. 9(5) 231–239 (2016)
Acknowledgements
The authors would like to acknowledge the support provided by DST under IDP scheme (No: IDP/MED/03/2015). We thank Dr. Sebastian Varghese (Consultant Radiologist, Metro Scans and Laboratory, Trivandrum) for providing the medical CT/MR images and supporting us in the preparation of manuscript.
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Kumar, S.N., Lenin Fred, A., Ajay Kumar, H., Sebastin Varghese, P. (2018). Performance Metric Evaluation of Segmentation Algorithms for Gold Standard Medical Images. In: Sa, P., Bakshi, S., Hatzilygeroudis, I., Sahoo, M. (eds) Recent Findings in Intelligent Computing Techniques . Advances in Intelligent Systems and Computing, vol 709. Springer, Singapore. https://doi.org/10.1007/978-981-10-8633-5_45
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