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Democratization and Integration of Genomic Profiling Tools

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Plant Systems Biology

Part of the book series: Methods in Molecular Biology™ ((MIMB,volume 553))

Abstract

Systems biology is a comprehensive means of creating a complete understanding of how all components of an organism work together to maintain and procreate life. By quantitatively profiling one at a time, the effect of thousands and millions of genetic and environmental perturbations on the cell, systems biologists are attempting to recreate and measure the effect of the many different states that have been explored during the 3 billion years in which life has evolved. A key aspect of this work is the development of innovative new approaches to quantify changes in the transcriptome, proteome, and metabolome. In this chapter we provide a review and evaluation of several genomic profiling techniques used in plant systems biology as well as make recommendations for future progress in their use and integration.

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Authors and Affiliations

  1. Department of Biochemistry, UW Biotechnology Center, University of Wisconsin-Madison, Madison, WI, USA

    Michael R. Sussman

  2. Department of Biochemistry, University of Wisconsin-Madison, Madison, WI, USA

    Edward L. Huttlin

  3. Department of Genetics, University of Wisconsin-Madison, Madison, WI, USA

    Dana J. Wohlbach

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  1. Michael R. Sussman
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  2. Edward L. Huttlin
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  3. Dana J. Wohlbach
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    © 2009 Humana Press, a part of Springer Science+Business Media, LLC

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    Sussman, M.R., Huttlin, E.L., Wohlbach, D.J. (2009). Democratization and Integration of Genomic Profiling Tools. In: Belostotsky, D. (eds) Plant Systems Biology. Methods in Molecular Biology™, vol 553. Humana Press. https://doi.org/10.1007/978-1-60327-563-7_20

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    • DOI: https://doi.org/10.1007/978-1-60327-563-7_20

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    • Publisher Name: Humana Press

    • Print ISBN: 978-1-60327-562-0

    • Online ISBN: 978-1-60327-563-7

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