Skip to main content
Log in

Location of the replication origin in the 9-kb repeat size class of rDNA in pea (Pisum sativum)

  • Published:
Plant Molecular Biology Aims and scope Submit manuscript

Abstract

The replication origin of the 9-kb rDNA repeat size class of pea (Pisum sativum cv. Alaska) was identified by benzoylated naphthoylated DEAE-cellulose column chromatography and Southern blotting procedures. The origin is located at or near a 0.19-kb EcoR I fragment in the non-transcribed spacer region between the 25S and 18S rRNA genes. Identification of the origin was based on three criteria: (i) an enrichment of the 0.19-kb fragment in replicating rDNA from asynchronously dividing root meristematic cells, (ii) the scarcity of the 0.19-kb fragment in rDNA from non-dividing carbohydrate starved cells, and (iii) a 60-min periodic enrichment of the 0.19-kb fragment in replicating rDNA that temporally coincides with the sequential initiation of replication of replicon families in synchronized pea root cells.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. Bozzoni I, Baldari CT, Amaldi F, Buongiorno-Nardelli M: Replication of ribosomal DNA in Xenopus laevis. Eur J Biochem 118: 585–590, 1980.

    Google Scholar 

  2. Burhans WC, Selegue JE, Heintz NH: Isolation of the origin of replication associated with the amplified Chinese hamster dihydrofolate reductase domain. Proc Natl Acad Sci USA 83: 7790–7794, 1986.

    Google Scholar 

  3. Burhans WC, Selegue JE, Heintz NH: Replication intermediates formed during initiation of DNA synthesis in methotrexate-resistant CHOC 400 cells are enriched sequences derived from a specific, amplified restriction fragment. Biochem 25: 441–449, 1986.

    Google Scholar 

  4. Cech TR, Brehm S: Replication of the extrachromosomal ribosomal RNA genes of Tetrahymena thermophila. Nucl Acids Res 9: 3531–3543, 1981.

    Google Scholar 

  5. Cullis CA, Davies DR: Ribosomal DNA amounts in Pisum sativum. Genetics 81: 485–492, 1975.

    Google Scholar 

  6. Ellis THN, Davies DR, Castleton JA, Bedford ID: The organization and genetics of rDNA length variants in peas. Chromosoma 91: 74–81, 1984.

    Google Scholar 

  7. Gatti RA, Concannon R, Salser W: Multiple use of Southern blots. BioTechniques 2: 148–155, 1984.

    Google Scholar 

  8. Ingle J, Sinclair J: Ribosomal RNA genes and plant development. Nature 235: 30–32, 1979.

    Google Scholar 

  9. Jorgensen RA, Cuellar RE, Thompson WF, Kavanagh TA: Structure and variation in ribosomal RNA genes of pea. Plant Mol Biol 8: 3–12, 1987.

    Google Scholar 

  10. Karrer K, Gall JG: The macronuclear ribosomal DNA of Tetrahymena pyriformis is a palindrome. J Mol Biol 104: 421–453, 1976.

    Google Scholar 

  11. Maniatis T, Fritsch EF, Sambrook J: Molecular Cloning, A Laboratory Manual. Cold Spring Harbor Laboratory, 1982.

  12. McKnight SL, Bustin M, Miller OL: Electron microscopic analysis of chromosome metabolism in the Drosophila melanogaster embryo. Cold Spring Harbor Symp Quant Biol 42: 741–754, 1978.

    Google Scholar 

  13. Reed KC, Mann DA: Rapid transfer of DNA from agarose gels to nylon membranes. Nucl Acids Res 20: 7207–7221, 1985.

    Google Scholar 

  14. Rhode SL: Replication process of the parvovirus H-1 replicative-form DNA. J Virol 21: 694–712, 1977.

    Google Scholar 

  15. Saffer LD, Miller OL: Electron microscopic study of Saccharomyces cerevisiae rDNA chromatin replication. Mol Cell Biol 6: 1148–1157, 1986.

    Google Scholar 

  16. Schvartzman JB, Krimer DB, Van'tHof J: The effects of different thymidine concentrations on DNA replication in pea-root cells synchronized by a protracted 5-fluorodeoxyuridine treatment. Exptl Cell Res 150: 379–389, 1984.

    Google Scholar 

  17. Schvartzman JB, Chenet B, Bjerknes CA, Van'tHof J: Nascent replicons are synchronously joined at the end of S phase or during G2 phase in peas. Biochim Biophys Acta 653: 185–192, 1981.

    Google Scholar 

  18. Spotila LD, Huberman JA: Method for mapping DNA replication origins. Mol Cell Biol 5: 85–92, 1985.

    Google Scholar 

  19. Van'tHof J, Bjerknes CA: 18 μm replication units of chromosomal DNA fibers of differentiated cells of pea (Pisum sativum). Chromosoma 64: 287–294, 1977.

    Google Scholar 

  20. Van'tHof J, Bjerknes CA: Similar replicon properties of higher plant cells with different S periods and genome sizes. Exptl Cell Res 136: 461–465, 1981.

    Google Scholar 

  21. Van'tHof J, Bjerknes CA, Delihas NC: Excision and replication of extrachromosomal DNA of pea (Pisum sativum). Mol Cell Biol 3: 172–181, 1983.

    Google Scholar 

  22. Van'tHof J, Bjerknes CA, Lamm SS: Meristematic precursors of vascular parenchyma differentiate from G2 phase after replicating DNA discontinuously. Amer J Bot 73: 87–95, 1986.

    Google Scholar 

  23. Van'tHof J, Hernández P, Bjerknes CA, Kraszewska EK, Lamm SS: Replication of the rRNA and legumin genes in synchronized root cells of pea (Pisum sativum): evidence for transient EcoR I sites in replicating rRNA genes. Plant Mol Biol 8: 133–143, 1987.

    Google Scholar 

  24. Van't Hof J, Lamm SS, Bjerknes CA: Detection of replication initiation by a replicon family in DNA of synchronized pea (Pisum sativum) root cells using benzoylated naphthoylated DEAE-cellulose chromatography. Plant Mol Biol (this issue).

  25. Watson JC, Kaufman LS, Thompson WF: Developmental regulation of cytosine methylation in the nuclear ribosomal RNA genes of Pisum sativum. J Mol Biol 193: 15–26, 1987.

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Van't Hof, J., Hernández, P., Bjerknes, C.A. et al. Location of the replication origin in the 9-kb repeat size class of rDNA in pea (Pisum sativum). Plant Mol Biol 9, 87–95 (1987). https://doi.org/10.1007/BF00015641

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00015641

Key words

Navigation