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Functional MoS2 nanosheets for precursor and mature microRNA detection in living cells

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Abstract

Mature microRNAs (miRNAs) are small-sized RNAs cleaved from precursor microRNAs (pre-miRNAs) by the RNase Dicer. Various miRNAs play key regulatory roles in tumorigenesis and metastasis, and are therefore potential diagnostic and prognostic cancer biomarkers. However, detecting miRNAs and pre-miRNAs accurately and selectively in living cells remains a major challenge, as the mature miRNA sequence is also present in its pre-miRNA and current sequence probes exhibit poor gene delivery efficiency. Herein, we report a strategy for selectively and accurately detecting miRNA-21 and pre-miRNA-21 in living cells using functional MoS2 nanosheets (NSs) loaded with rationally engineered molecular beacons (MBs). The exfoliated MoS2 nanosheets (NSs) with a mean lateral diameter of 50–70 nm were functionalized with the aptamer AS1411 and polyethylene glycol (MoS2-PEG-AS) to achieve target-cell-specific delivery and to enhance biocompatibility. The large available surface of the MoS2-PEG-AS was loaded with MB probes. The resulting MoS2-PEG-AS/MBs present cancer-cell-targeting ability, good protection properties, good optical stability, and biocompatibility. We demonstrated that the resulting nanoprobes can selectively image miRNA-21 and pre-miRNA-21 in various cell lines by facilitating enhanced fluorescence in the presence of miRNA-21 and pre-miRNA-21. Thus, these MoS2-PEG-AS/MBs are potentially a tool to discriminate between intracellular miRNA and pre-miRNA at different expression levels.

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References

  1. He L, Hannon GJ. MicroRNAs: small RNAs with a big role in gene regulation. Nat Rev Genet. 2004;5:522–31.

    Article  CAS  Google Scholar 

  2. Calin GA, Croce CM. MicroRNA signatures in human cancers. Nat Rev Cancer. 2006;6:857–66.

    Article  CAS  PubMed  Google Scholar 

  3. Filipowicz W, Bhattacharyya SN, Sonenberg N. Mechanisms of post-transcriptional regulation by microRNAs: are the answers in sight? Nat Rev Genet. 2008;9:102–14.

    Article  CAS  Google Scholar 

  4. Di Leva G, Croce CM. miRNA profiling of cancer. Curr Opin Genet Dev. 2013;23:3–11.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  5. Ma L, Teruya-Feldstein J, Weinberg RA. Tumour invasion and metastasis initiated by microRNA-10b in breast cancer. Nature. 2007;449:682–8.

    Article  CAS  PubMed  Google Scholar 

  6. Kosaka N, Iguchi H, Ochiya T. Circulating microRNA in body fluid: a new potential biomarker for cancer diagnosis and prognosis. Cancer Sci. 2010;101:2087–92.

    Article  CAS  PubMed  Google Scholar 

  7. Kim SW, Li Z, Moore PS, Monaghan AP, Chang Y, Nichols M, et al. A sensitive non-radioactive northern blot method to detect small RNAs. Nucleic Acids Res. 2010;38:e98.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  8. Yin JQ, Zhao RC, Morris KV. Profiling microRNA expression with microarrays. Trends Biotechnol. 2008;26:70–6.

    Article  CAS  PubMed  Google Scholar 

  9. Lee JM, Jung Y. Two-temperature hybridization for microarray detection of label-free microRNAs with attomole detection and superior specificity. Angew Chem Int Ed Engl. 2011;50:12487–90.

    Article  CAS  PubMed  Google Scholar 

  10. Chen C, Ridzon DA, Broomer AJ, Zhou Z, Lee DH, Nguyen JT, et al. Real-time quantification of microRNAs by stem-loop RT-PCR. Nucleic Acids Res. 2005;33:e179.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  11. Ro S, Park C, Jin J, Sanders KM, Yan W. A PCR-based method for detection and quantification of small RNAs. Biochem Biophys Res Commun. 2006;351:756–63.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  12. Duan D, Zheng KX, Shen Y, Cao R, Jiang L, Lu Z, et al. Label-free high-throughput microRNA expression profiling from total RNA. Nucleic Acids Res. 2011;39:e154.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  13. Gaur A, Jewell DA, Liang Y, Ridzon D, Moore JH, Chen C, et al. Characterization of microRNA expression levels and their biological correlates in human cancer cell lines. Cancer Res. 2007;67:2456–68.

    Article  CAS  PubMed  Google Scholar 

  14. Zeng Z, Yin Z, Huang X, Li H, He Q, Lu G, et al. Single-layer semiconducting nanosheets: high-yield preparation and device fabrication. Angew Chem Int Ed Engl. 2011;50:11093–7.

    Article  CAS  PubMed  Google Scholar 

  15. Radisavljevic B, Radenovic A, Brivio J, Giacometti V, Kis A. Single-layer MoS2 transistors. Nat Nanotechnol. 2011;6:147–50.

  16. Li H, Yin Z, He Q, X Huang GL, Fam DW, et al. Fabrication of single- and multilayer MoS2 film-based field-effect transistors for sensing NO at room temperature. Small. 2012;8:63–7.

  17. Yin Z, Li H, Jiang L, Shi Y, Sun Y, Lu G, et al. Single-layer MoS2 phototransistors. ACS Nano. 2012;6:74–80.

  18. Zhou W, Du Z Yin Y, Huang X, Zeng Z, Fan Z, et al. Synthesis of few-layer MoS2 nanosheet-coated TiO2 nanobelt heterostructures for enhanced photocatalytic activities. Small. 2013;9:140–7.

  19. He Q, Zeng Z, Yin Z, Li H, Wu S, Huang X, et al. Fabrication of flexible MoS2 thin-film transistor arrays for practical gas-sensing applications. Small. 2012;8:2994–9.

  20. Zhu C, Zeng Z, Li H, Li F, Fan C, Zhang H. Single-layer MoS2-based nanoprobes for homogeneous detection of biomolecules. J Am Chem Soc. 2013;135:5998–6001.

  21. Dai W, Dong H, Fugetsu B, Cao Y, Lu H, Ma X, et al. Tunable fabrication of molybdenum disulfide quantum dots for intracellular microRNA detection and multiphoton bioimaging. Small. 2015;11:4158–64.

  22. Chou SS, De M, Kim J, Byun S, Dykstra C, Yu J, et al. Ligand conjugation of chemically exfoliated MoS2. J Am Chem Soc. 2013;135:4584–7.

  23. Zhou KG, Mao NN, Wang HX, Peng Y, Zhang HL. A mixed-solvent strategy for efficient exfoliation of inorganic graphene analogues. Angew Chem Int Ed Engl. 2011;50:10839–42.

    Article  CAS  PubMed  Google Scholar 

  24. Baker MB, Bao G, Searles CD. In vitro quantification of specific microRNA using molecular beacons. Nucleic Acids Res. 2012;40:e13.

    Article  CAS  PubMed  Google Scholar 

  25. Medina PP, Slack FJ. microRNAs and cancer: an overview. Cell Cycle. 2008;7:2485–92.

    Article  CAS  PubMed  Google Scholar 

  26. Lu Z, Liu M, Stribinskis V, Klinge CM, Ramos KS, Colburn NH, et al. MicroRNA-21 promotes cell transformation by targeting the programmed cell death 4 gene. Oncogene. 2008;27:4373–9.

    Article  CAS  PubMed  Google Scholar 

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Acknowledgements

The work was supported by the Major Program of the National Natural Science Foundation of China (21890742); the National Natural Science Foundation of China (21874008, 21475008); the Special Foundation for State Major Research Program of China (grant nos. 2016YFC0106602 and 2016YFC0106601); the Open Research Fund Program of the Beijing Key Lab of Plant Resource Research and Development, Beijing Technology and Business University (PRRD-2016-YB2); the Fundamental Research Funds for the Central Universities (grant no. FRF-BD-17-016A); and the Beijing Municipal Science and Technology Commission (grant no. z131102002813058).

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Correspondence to Huiting Lu, Changtao Wang or Haifeng Dong.

Ethics declarations

The MCF-7 cells (human breast cancer cells), HeLa cells (human cervical carcinoma cells), and NHDF cells (normal human dermal fibroblasts) were obtained from Beijing Dingguo Changsheng Biotechnology Co., Ltd. (Beijing, China). The animal experiments were approved by the Institutional Animal Care and Use Committee of the Beijing institute of Basic Medical Science (Beijing, Chain). The animal experiment was conducted in compliance with the National Regulation of China for the Care and Use of Laboratory Animals.

Conflict of interest

Fan Yang and Pei Liu received research grants from the Beijing Advanced Innovation Center for Food Nutrition and Human Health, Beijing Technology and Business University. The authors declare that they have no conflict of interest.

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Published in the topical collection Young Investigators in (Bio-)Analytical Chemistry with guest editors Erin Baker, Kerstin Leopold, Francesco Ricci, and Wei Wang.

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Yang, F., Liu, P., Meng, X. et al. Functional MoS2 nanosheets for precursor and mature microRNA detection in living cells. Anal Bioanal Chem 411, 4559–4567 (2019). https://doi.org/10.1007/s00216-019-01753-x

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  • DOI: https://doi.org/10.1007/s00216-019-01753-x

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