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Parents’ Perspectives on Variants of Uncertain Significance from Chromosome Microarray Analysis

  • Original Research
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Journal of Genetic Counseling

Abstract

Chromosomal microarray analysis (CMA) for unexplained anomalies and developmental delay has improved diagnosis rates, but results classified as variants of uncertain significance (VUS) may challenge both clinicians and families. We explored the impact of such results on families, including parental knowledge, understanding and interpretation. Semi-structured telephone interviews were conducted with parents (N = 14) who received genetic counseling for a VUS in their child. Transcripts were analyzed through an iterative coding process. Participants demonstrated a range of recall and personal interpretation regarding whether test results provided a causal explanation for their children’s health issues. Participants maintained contradictory interpretations, describing results as answers while maintaining that little clarification of their child’s condition had been provided. Reported benefits included obtaining medical services and personal validation. Parents described adaptation/coping processes similar to those occurring after positive test results. Recall of terminology, including “VUS” and precise CMA abnormalities, was poor. However, most demonstrated conceptual understanding of scientific uncertainty. All participants expressed intentions to return for recommended genetics follow-up but had misconceptions about how this would occur. These results provide insight into the patient-and-family experience when receiving uncertain genomic findings, emphasize the importance of exploring uncertainty during the communication process, and highlight areas for potential attention or improvement in the clinical encounter.

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References

  • Ali-Khan, S. E., Daar, A. S., Shuman, C., Ray, P. N., & Scherer, S. W. (2009). Whole genome scanning: resolving clinical diagnosis and management amidst complex data. Pediatric Research, 66(4), 357–363. doi:10.1203/PDR.0b013e3181b0cbd8.

    Article  CAS  PubMed  Google Scholar 

  • Ashtiani, S., Makela, N., Carrion, P., & Austin, J. (2014). Parents’ experiences of receiving their child’s genetic diagnosis: A qualitative study to inform clinical genetics practice. American Journal of Medical Genetics Part A, 164(6), 1496–1502. doi:10.1002/ajmg.a.36525.

    Article  PubMed Central  Google Scholar 

  • Biesecker, B. B., Klein, W., Lewis, K. L., Fisher, T. C., Wright, M. F., Biesecker, L. G., & Han, P. K. (2014). How do research participants perceive “uncertainty” in genome sequencing? Genetics in Medicine: Official Journal of the American College of Medical Genetics, 16(12), 977–980. doi:10.1038/gim.2014.57.

    Article  Google Scholar 

  • Coughlin, C. R., Scharer, G. H., & Shaikh, T. H. (2012). Clinical impact of copy number variation analysis using high-resolution microarray technologies: advantages, limitations and concerns. Genome Medicine, 4(10), 80. doi:10.1186/gm381.

    Article  PubMed Central  PubMed  Google Scholar 

  • Cutting, G. R. (2014). Annotating DNA variants is the next major goal for human genetics. American Journal of Human Genetics, 94(1), 5–10. doi:10.1016/j.ajhg.2013.12.008.

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • DeCuir-Gunby, J. T., Marshall, P. L., & McCulloch, A. W. (2011). Developing and using a codebook for the analysis of interview data: an example from a professional development research project. Field Methods, 23(2), 136–155. doi:10.1177/1525822X10388468.

    Article  Google Scholar 

  • Fanos, J. H. (2012). New “first families”: the psychosocial impact of new genetic technologies. Genetics in Medicine: Official Journal of the American College of Medical Genetics, 14(2), 189–190. doi:10.1038/gim.2011.17.

    Article  Google Scholar 

  • Graungaard, A. H., & Skov, L. (2007). Why do we need a diagnosis? A qualitative study of parents’ experiences, coping and needs, when the newborn child is severely disabled. Child: Care, Health and Development, 33(3), 296–307. doi:10.1111/j.1365-2214.2006.00666.x.

    CAS  Google Scholar 

  • Jez, S., Martin, M., South, S., Vanzo, R., & Rothwell, E. (2015). Variants of unknown significance on chromosomal microarray analysis: parental perspectives. Journal of Community Genetics. doi:10.1007/s12687-015-0218-4.

    PubMed Central  PubMed  Google Scholar 

  • Lazarus, R. S., & Folkman, S. (1987). Transactional theory and research on emotions and coping. European Journal of Personality, 1(3), 141–169. doi:10.1002/per.2410010304.

    Article  Google Scholar 

  • Lee, C., Iafrate, A. J., & Brothman, A. R. (2007). Copy number variations and clinical cytogenetic diagnosis of constitutional disorders. Nature Genetics, 39(7 Suppl), S48–54. doi:10.1038/ng2092.

    Article  CAS  PubMed  Google Scholar 

  • Lewis, C., Skirton, H., & Jones, R. (2010). Living without a diagnosis: the parental experience. Genetic Testing and Molecular Biomarkers, 14(6), 807–815. doi:10.1089/gtmb.2010.0061.

    Article  PubMed  Google Scholar 

  • Lipinski, S. E., Lipinski, M. J., Biesecker, L. G., & Biesecker, B. B. (2006). Uncertainty and perceived personal control among parents of children with rare chromosome conditions: The role of genetic counseling. American Journal of Medical Genetics. Part C, Seminars in Medical Genetics, 142C(4), 232–240. doi:10.1002/ajmg.c.30107.

    Article  PubMed  Google Scholar 

  • Lopez-Rangel, E., Mickelson, E. C. R., & Lewis, M. E. S. (2008). The value of a genetic diagnosis for individuals with intellectual disabilities: optimising healthcare and function across the lifespan. The British Journal of Developmental Disabilities, 54(Part 2), 69–82.

    Article  Google Scholar 

  • Manning, M., Hudgins, L., Practice, P., & Committee, G. (2010). Array-based technology and recommendations for utilization in medical genetics practice for detection of chromosomal abnormalities. Genetics in Medicine: Official Journal of the American College of Medical Genetics, 12(11), 742–745. doi:10.1097/GIM.0b013e3181f8baad.

    Article  CAS  Google Scholar 

  • Michie, S., Marteau, T. M., & Bobrow, M. (1997). Genetic counselling: the psychological impact of meeting patients’ expectations. Journal of Medical Genetics, 34(3), 237–241.

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Miller, D. T., Adam, M. P., Aradhya, S., Biesecker, L. G., Brothman, A. R., Carter, N. P., & Ledbetter, D. H. (2010a). Consensus statement: chromosomal microarray is a first-tier clinical diagnostic test for individuals with developmental disabilities or congenital anomalies. American Journal of Human Genetics, 86(5), 749–764. doi:10.1016/j.ajhg.2010.04.006.

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Miller, F. A., Hayeems, R. Z., & Bytautas, J. P. (2010b). What is a meaningful result? disclosing the results of genomic research in autism to research participants. European Journal of Human Genetics: EJHG, 18(8), 867–871. doi:10.1038/ejhg.2010.34.

    Article  PubMed Central  PubMed  Google Scholar 

  • Palmer, E., Speirs, H., Taylor, P. J., Mullan, G., Turner, G., Einfeld, S., & Mowat, D. (2014). Changing interpretation of chromosomal microarray over time in a community cohort with intellectual disability. American Journal of Medical Genetics Part A, 164A(2), 377–385. doi:10.1002/ajmg.a.36279.

    Article  PubMed  Google Scholar 

  • Reiff, M., Bernhardt, B. A., Mulchandani, S., Soucier, D., Cornell, D., Pyeritz, R. E., & Spinner, N. B. (2012). “What does it mean?”: uncertainties in understanding results of chromosomal microarray testing. Genetics in Medicine: Official Journal of the American College of Medical Genetics, 14(2), 250–258. doi:10.1038/gim.2011.52.

    Article  Google Scholar 

  • Rosenthal, E. T., Biesecker, L. G., & Biesecker, B. B. (2001). Parental attitudes toward a diagnosis in children with unidentified multiple congenital anomaly syndromes. American Journal of Medical Genetics, 103(2), 106–114.

    Article  CAS  PubMed  Google Scholar 

  • Schneider, K. I., & Schmidtke, J. (2014). Patient compliance based on genetic medicine: a literature review. Journal of Community Genetics, 5(1), 31–48. doi:10.1007/s12687-013-0160-2.

    Article  PubMed Central  PubMed  Google Scholar 

  • Shaffer, L. G., Coppinger, J., Alliman, S., Torchia, B. A., Theisen, A., Ballif, B. C., & Bejjani, B. A. (2008). Comparison of microarray-based detection rates for cytogenetic abnormalities in prenatal and neonatal specimens. Prenatal Diagnosis, 28(9), 789–795. doi:10.1002/pd.2053.

    Article  PubMed  Google Scholar 

  • Turbitt, E., Halliday, J. L., Amor, D. J., & Metcalfe, S. A. (2014). Preferences for results from genomic microarrays: comparing parents and health care providers. Clinical Genetics. doi:10.1111/cge.12398.

    PubMed  Google Scholar 

  • Vos, J., Otten, W., van Asperen, C., Jansen, A., Menko, F., & Tibben, A. (2008). The counsellees’ view of an unclassified variant in BRCA1/2: Recall, interpretation, and impact on life. Psycho-Oncology, 17(8), 822–830. doi:10.1002/pon.1311.

    Article  PubMed  Google Scholar 

  • Whitmarsh, I., Davis, A. M., Skinner, D., & Bailey, D. B., Jr. (2007). A place for genetic uncertainty: parents valuing an unknown in the meaning of disease. Social Science & Medicine (1982), 65(6), 1082–1093. doi:10.1016/j.socscimed.2007.04.034.

    Article  Google Scholar 

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Acknowledgments

We thank the parents who participated in interviews as a part of this study. We also thank Alicia Giordimaina, Danielle Dubois, Bailey Hulswit, and Emily Wagoner for their assistance with this study. This work was supported by the National Society of Genetic Counselors Jane Engelberg Memorial Fellowship, the Michigan Association of Genetic Counselors, Inc., and the University of Michigan Rackham Graduate School. This study was completed in partial fulfillment of the requirements for Master of Science, University of Michigan Genetic Counseling Program, Ann Arbor, Michigan.

Conflict of Interest

Authors Lesli A. Kiedrowski, Kailey M. Owens, Beverly M. Yashar, and Jane L. Schuette declare that they have no conflict of interest.

Human Studies and Informed Consent

All procedures followed were in accordance with the ethical standards of the responsible committee on human experimentation (institutional and national) and with the Helsinki Declaration of 1975, as revised in 2000. Informed consent was obtained from all patients for being included in the study.

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Correspondence to Lesli A. Kiedrowski.

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Kiedrowski, L.A., Owens, K.M., Yashar, B.M. et al. Parents’ Perspectives on Variants of Uncertain Significance from Chromosome Microarray Analysis. J Genet Counsel 25, 101–111 (2016). https://doi.org/10.1007/s10897-015-9847-3

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