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Dissolved organic matter, nutrients, and bacteria in Antarctic soil core from Schirmacher Oasis

  • Humic Substances in the Environment
  • Published:
Journal of Soils and Sediments Aims and scope Submit manuscript

Abstract

Purpose

This study focuses on the application of HPLC in dissolved organic matter (DOM) research in Antarctic environment together with nutrients and heterotrophic bacteria (HB) analyses. The specific aims were to investigate changes in DOM components characteristics and in nutrients in soil core from ground active layer and upper permafrost, to relate obtained data to active heterotrophic bacteria records after applying statistical data treatment methods, and to explore the potential impact of environment.

Materials and methods

A single Antarctic 1.9-m deep soil core drilled at a site without human impact from Schirmacher Oasis, located 70° 46′ 02″ S and 11° 45′ 11″ E, was explored. The chromophoric DOM (CDOM) was characterized by soil water analysis using multi-wavelength HPLC. Total organic carbon and total nitrogen were determined by elemental analysis, the total phosphorus by inductively coupled plasma spectrometry. The vertical changes in those nutrients and their ratios were investigated. The microbiological analysis was accomplished through the determination of psychrotrophic and psychrophilic aerobic HB numbers by colony-forming units counting method, and by epifluorescence microscopy examination. Cluster analysis using the Ward method and principal component analysis was performed on the chromatographic and microbiology data to reveal similar layers in studied soil core.

Results and discussion

In active soil layer, the CDOM was missing thus indicating rather active decomposition of organic material or organic debris by the local microbial community. In deep permafrost layers, the quantity of CDOM preserved in soil water increased. The content of total organic carbon in soil was low, between 0.05 and 0.2%, and decreased down the core. The vertical changes in nutrients (total N and P), the ratios C/N and C/P, followed total organic carbon profile suggesting similar sources. Microbiological analyses showed decreasing vertical concentrations of active HB. Statistical data treatment methods enabled clustering of soil core into three zones according to depth.

Conclusions

The obtained results contribute to better understanding of organic carbon-related processes in an almost un-polluted Antarctic environment. The CDOM, macronutrients, C/N, C/P, and HB profile characteristics of the Antarctic soil core clearly demonstrate the effect of environment (active or permafrost soil layers). The study demonstrated that combining HPLC with multi-wavelength detection and microbial analyses with statistical data treatment is potentially a promising tool of investigating changes in Antarctic soil DOM and in soil waters generally.

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References

  • AARI- Arctic and Antarctic Research Institute, Russian Federation NADC, Project Antarctica. http://www.aari.aq. Accessed 26 March 2017

  • Akkanen J, Lyytikäinen M, Tuikka A, Kukkonen JVK (2005) Dissolved organic matter in pore water of freshwater sediments: effects of separation procedure on quantity, quality and functionality. Chemosphere 60(11):1608–1615. https://doi.org/10.1016/j.chemosphere.2005.02.045

    Article  CAS  Google Scholar 

  • Allen SD, Brock TD (1968) The adaptation of heterotrophic microorganisms to different temperatures. Ecology 49(2):343–346. https://doi.org/10.2307/1934466

    Article  Google Scholar 

  • Arenz BE, Blanchette RA (2011) Distribution and abundance of soil fungi in Antarctica at sites on the Peninsula, Ross Sea Region and McMurdo Dry Valleys. Soil Biol Biochem 43(2):308–315. https://doi.org/10.1016/j.soilbio.2010.10.016

    Article  CAS  Google Scholar 

  • Balke J, Haendel D, Krüger W (1991) Contribution to the weathering-controlled removal of chemical elements from the active debris layer of Schirmacher Oasis, East Antarctica. Z Geol Wiss 19:153–156

    Google Scholar 

  • Barrett JE, Virginia RA, Parsons AN, Wall DH (2006) Soil carbon turnover model for the McMurdo Dry Valleys, Antarctica. Soil Biol Biochem 38(10):3065–3082. https://doi.org/10.1016/j.soilbio.2006.03.025

    Article  CAS  Google Scholar 

  • Bormann P, Fritzsche D (eds) (1995) The Schirmacher Oasis, Queen Maud Land, East Antarctica. Justus Perthes Verlag, Gotha

    Google Scholar 

  • Brereton RG (2003) Chemometrics: data analysis for the laboratory and chemical plant. Wiley, Chichester

    Book  Google Scholar 

  • Dolgin IM, Marshunova MS, Petrov LS (eds) (1976) Spravochnik po klimatu Antarktidy, Tom I (Handbook of Antarctic Climate), vol Vol. (I). Gidrometeoizdat, Leningrad (in Russian)

    Google Scholar 

  • Filella M (2010) Quantifying humics in freshwaters:purpose and methods. Chem Ecol 26(sup2):177–186. https://doi.org/10.1080/02757540.2010.494159

    Article  CAS  Google Scholar 

  • Fries MR, Zhou J, Chee-Sanford J, Tiedje JM (1994) Isolation, characterization, and distribution of denitrifying toluene degraders from a variety of habitates. Appl Environ Microbiol 60(8):2802–2810

    CAS  Google Scholar 

  • Gajananda K (2007) Soil organic carbon and microbial activity: east Antarctica. Eur J Soil Sci 58(3):704–713. https://doi.org/10.1111/j.1365-2389.2006.00857.x

    Article  Google Scholar 

  • Haendel D, Kaup E, Loopmann A, Wand U (1995) Physical and hydrochemical properties of water bodies. In: Bormann P, Fritzsche D (eds) The Schirmacher Oasis, Queen Maud Land, East Antarctica. Justus Perthes Verlag, Gotha, pp 279–295

    Google Scholar 

  • Hebert D, Richter W (1985) Moränen des Schelfeises als Höhenmarken in der Schirmacher Oase, Dronning Maud Land, Ostantarktika. Geod Geophys Veröff Berlin, R I 12:88–94

  • Hobbie JE, Daley RJ, Jasper S (1977) Use of Nuclepore filters for counting bacteria by fluorescence microscopy. Appl Environ Microbiol 33(5):1225–1228

    CAS  Google Scholar 

  • Hofstee EH, Balks MR, Petchey F, Campbell DI (2006) Soils of Seabee Hook, Cape Hallett, northern Victoria Land, Antarctica. Antarct Sci 18(04):473–486. https://doi.org/10.1017/S0954102006000526

    Article  Google Scholar 

  • ISO 10694 (1995) Soil quality - determination of organic and total carbon after dry combustion(elementary analysis). http://infostore.saiglobal.com/en-gb/Standards/ISO-10694-1995-209525/. Accessed 9 May 2017

  • ISO 11047 (1998) Soil quality - determination of cadmium, chromium, cobalt, copper, lead, manganese, nickel and zinc - Flame and electrothermal atomic absorption spectrometric methods. http://www.iso.org/standard/23117.html. Accessed 9 May 2017

  • ISO 13878 (1998) Soil quality - determination of total nitrogen content by dry combustion (elemental analysis). http://www.iso.org/standard/23117.html. Accessed 9 May 2017

  • Kalisz B, Lachacz A, Nitkiewicz M (2010) Transformation of organic matter in reclaimed post-lacustrine soils. In: Szajdak LW, Karabanov AK (eds) Physical, chemical and biological processes in soils. Prodruk, Poznan, pp 283–296

    Google Scholar 

  • Kaup E, Burgess JS (2002) Surface and subsurface flows of nutrients in natural and human impacted lake catchments on Broknes, Larsemann Hills, Antarctica. Antarct Sci 14(4):343–352. https://doi.org/10.1017/S0954102002000123

    Article  Google Scholar 

  • Krüger W (1995) Frost and insolation weathering. In: Bormann P, Fritzsche D (eds) The Schirmacher Oasis, Queen Maud Land, East Antarctica. Justus Perthes Verlag, Gotha, pp 190–199

    Google Scholar 

  • Lepane V, Kudrjašova M (2001) High-performance size exclusion chromatographic characterization of humic substances and dissolved organic matter from Baltic aquatic environment. Oil Shale 18:350–372

    CAS  Google Scholar 

  • Lepane V, Leeben A, Malashenko O (2004) Characterization of sediment pore-water dissolved organic matter of lakes by high-performance size exclusion chromatography. Aquat Sci 66(2):185–194. https://doi.org/10.1007/s00027-004-0703-z

    Article  CAS  Google Scholar 

  • Lepane V, Tõnno I, Alliksaar T (2010) HPLC approach for revealing age-related changes of aquatic dissolved organic matter in sediment core. Procedia Chem 2(1):101–108. https://doi.org/10.1016/j.proche.2009.12.016

    Article  CAS  Google Scholar 

  • Liu S, Lim M, Fabris R, Chow CWK, Drikas M, Korshin G, Amal R (2010) Multi-wavelength spectroscopic and chromatography study on the photocatalytic oxidation of natural organic matter. Water Res 44(8):2525–2532. https://doi.org/10.1016/j.watres.2010.01.036

    Article  CAS  Google Scholar 

  • Matilainen A, Vieno N, Tuhkanen T (2006) Efficiency of the activated carbon filtration in the natural organic matter removal. Environ Int 32(3):324–331. https://doi.org/10.1016/j.envint.2005.06.003

    Article  CAS  Google Scholar 

  • Moorhead DL, Doran PT, Fountain AG, Lyons WB, McKnight DM, Priscu JC (1999) Ecological legacies: impacts on ecosystem of the McMurdo Valleys. Bioscience 49(12):1009–1019. https://doi.org/10.1525/bisi.1999.49.12.1009

    Article  Google Scholar 

  • O’Loughlin EJ, Chin Y-P (2004) Quantification and characterization of dissolved organic carbon and iron in sedimentary porewater from Green Bay, WI, USA. Biogeochemistry 71(3):371–386. https://doi.org/10.1007/s10533-004-0373-x

    Article  CAS  Google Scholar 

  • Paech H-J, Stackebrandt W, Wetzel H-U (1995) Generalization of the geological history of the Schirmacher Oasis and Nunatak Metamorphic Complexes. In: Bormann P, Fritzsche D (eds) The Schirmacher Oasis, Queen Maud Land, East Antarctica. Justus Perthes Verlag, Gotha, pp 126–133

    Google Scholar 

  • Peuravuori J, Pihlaja K (1997) Molecular size distribution and spectroscopic properties of aquatic humic substances. Anal Chim Acta 337(2):133–149. https://doi.org/10.1016/S0003-2670(96)00412-6

    Article  CAS  Google Scholar 

  • Phartiyal B, Sharma A, Bera SK (2011) Glacial lakes and geomorphological evolution of Schirmacher Oasis, East Antarctica, during Late Quaternary. Quat Int 235(1-2):128–136. https://doi.org/10.1016/j.quaint.2010.11.025

    Article  Google Scholar 

  • Richter W (1985) Remarkable morphological forms in the Schirmacher Oasis, Dronning Maud Land, East Antarctica. Z Geol Wiss 13:381–398

    Google Scholar 

  • Richter W, Bormann P (1995a) Hydrology. In: Bormann P, Fritzsche D (eds) The Schirmacher Oasis, Queen Maud Land, East Antarctica. Justus Perthes Verlag, Gotha, pp 259–278

    Google Scholar 

  • Richter W, Bormann P (1995b) Geomorphology. In: Bormann P, Fritzsche D (eds) The Schirmacher Oasis, Queen Maud Land, East Antarctica. Justus Perthes Verlag, Gotha, pp 171–206

    Google Scholar 

  • Schwartzman DW (1999) Life, temperature, and the earth: the self-organizing biosphere. Columbia University Press, New York

  • Smolander A, Kitunen V (2002) Soil microbial activities and characteristics of dissolved organic C and N in the relation to tree species. Soil Biol Biochem 34(5):651–660. https://doi.org/10.1016/S0038-0717(01)00227-9

    Article  CAS  Google Scholar 

  • Szajdak LW, Karabanov AK (2010) Physical, chemical and biological processes in soils. Prodruk, Poznan

    Google Scholar 

  • Vartiainen T, Liimatainen A, Kauranen P (1987) The use of TSK size exclusion columns in determination of the quality and quantity of humus in raw waters and drinking waters. Sci Total Environ 62:75–84. https://doi.org/10.1016/0048-9697(87)90484-0

    Article  CAS  Google Scholar 

  • Vestin JLK, Norström SH, Bylund D, Lundström US (2008) Soil solution and stream water chemistry in a forested catchment II: influence of organic matter. Geoderma 144(1-2):271–278. https://doi.org/10.1016/j.geoderma.2007.11.027

    Article  CAS  Google Scholar 

  • Zimmermann R (1977) Estimation of bacterial number and biomass by epifluorescence microscopy and scanning electron microscopy. In: Rheinheimer G (ed) Microbial ecology of the brackish water environment. Ecol stud 25, Berlin, pp 103–120. https://doi.org/10.1007/978-3-642-66791-6_10

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Acknowledgements

The authors are thankful to the members of Indian Antarctic Expedition for logistic support and assistance during sampling.

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Correspondence to Viia Lepane.

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Responsible editor: Jerzy Weber

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Lepane, V., Künnis-Beres, K., Kaup, E. et al. Dissolved organic matter, nutrients, and bacteria in Antarctic soil core from Schirmacher Oasis. J Soils Sediments 18, 2715–2726 (2018). https://doi.org/10.1007/s11368-018-1913-7

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  • DOI: https://doi.org/10.1007/s11368-018-1913-7

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