Skip to main content

Artificial Enlargement of a Training Set for Statistical Shape Models: Application to Cardiac Images

  • Conference paper
Functional Imaging and Modeling of the Heart (FIMH 2005)

Part of the book series: Lecture Notes in Computer Science ((LNTCS,volume 3504))

Included in the following conference series:

Abstract

Different methods were evaluated to enlarge artificially a training set which is used to build a statistical shape model. In this work, the shape model was built from MR data of 25 subjects and it consisted of ventricles, atria and epicardium. The method adding smooth non-rigid deformations to original training set examples produced the best results. The results indicated also that artificial deformation modes model better an unseen object than an equal number of standard PCA modes generated from original data.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 84.99
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 109.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  1. Christensen, G.E., Miller, M.I., Vannier, M.W., Grenander, U.: Individualizing neuroanatomical atlases using massively parallel computer. IEEE Computer 29, 32–38 (1996)

    Google Scholar 

  2. Wang, Y., Staib, L.H.: Pysical model-based non-rigid registration incorporating statistical shape information. Med. Image Anal. 4, 7–20 (2000)

    Article  Google Scholar 

  3. Cootes, T.F., Taylor, C.J., Cooper, D.H., Graham, J.: Active shape models - their training and application. Computer Vision and Image Understanding 61, 38–59 (1995)

    Article  Google Scholar 

  4. Davies, R., Twining, C., Cootes, T., Waterton, J., Taylor, C.: A minimum description length approach to statistical shape modeling. IEEE Trans. Med. Imag. 21, 525–537 (2002)

    Article  Google Scholar 

  5. Frangi, A., Rueckert, D., Schnabel, J., Niessen, W.: Automatic construction of multiple-object three-dimensional statistical shape models: Applications to cardiac modeling. IEEE Trans. Med. Imag. 21, 1151–1166 (2002)

    Article  Google Scholar 

  6. Kaus, M., Pekar, V., Lorenz, C., Truyen, R., Lobregt, S., Weese, J.: Automated 3-D PDM construction from segmented images using deformable models. IEEE Trans. Med. Imag. 22, 1005–1013 (2003)

    Article  Google Scholar 

  7. van Ent, D., de Munck, J., Kaas, A.: A fast method to derive realistic BEM models for E/MEG source reconstruction. IEEE Trans. Biomed. Eng. 48, 414–423 (2001)

    Google Scholar 

  8. Rueckert, D., Frangi, A., Schnabel, J.: Automatic construction of 3-D statistical deformation models of the brain using nonrigid registration. IEEE Trans. Med. Imag. 22, 1014–1025 (2003)

    Article  Google Scholar 

  9. Lötjönen, J., Kivistö, S., Koikkalainen, J., Smutek, D., Lauerma, K.: Statistical shape model of atria, ventricles and epicardium from short- and long-axis MR images. Med. Image Anal. 8, 371–386 (2004)

    Article  Google Scholar 

  10. Lötjönen, J., Mäkelä, T.: Elastic matching using a deformation sphere. In: Niessen, W.J., Viergever, M.A. (eds.) MICCAI 2001. LNCS, vol. 2208, pp. 541–548. Springer, Heidelberg (2001)

    Chapter  Google Scholar 

  11. Cootes, T.F., Taylor, C.J.: Combining point distribution models with shape models based on finite element analysis. Image and Vision Computing 13, 403–409 (1995)

    Article  Google Scholar 

  12. Shen, D., Davatzikos, C.: An adaptive-focus statistical shape model for segmentation and shape modeling of 3-D brain structures. IEEE Trans. Med. Imag. 20, 257–270 (2001)

    Article  Google Scholar 

  13. Shen, D., Davatzikos, C.: An adaptive-focus deformable model using statistical and geometric information. IEEE Trans. Patt. Anal. Mach. Intell. 22, 906–913 (2000)

    Article  Google Scholar 

  14. Davatzikos, C., Tao, X., Shen, D.: Hierarchical active shape models using the wavelet transform. IEEE Trans. Med. Imag. 22, 414–423 (2003)

    Article  Google Scholar 

  15. de Bruijne, M., van Ginneken, B., Viergever, M., Niessen, W.: Adapting active shape models for 3d segmentation of tubular structures in medical images. In: Taylor, C.J., Noble, J.A. (eds.) IPMI 2003. LNCS, vol. 2732, pp. 136–147. Springer, Heidelberg (2003)

    Chapter  Google Scholar 

  16. Warfield, S.K., Zou, K.H., Wells, W.M.: Simultaneous truth and performance level estimation (STAPLE): An algorithm for the validation of image segmentation. IEEE Trans. Med. Imag. 23, 903–921 (2004)

    Article  Google Scholar 

  17. Lorenzo-Valdés, M., Sanchez-Ortiz, G.I., Elkington, A.G., Mohiaddin, R.H., Rueckert, D.: Segmentation of 4D cardiac MR images using a probabilistic atlas and the EM algorithm. Med. Image Anal. 8, 255–265 (2004)

    Article  Google Scholar 

  18. Horn, J.L.: A rationale and test for the number of factors in factor analysis. Psychometrika 30, 179–186 (1965)

    Article  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2005 Springer-Verlag Berlin Heidelberg

About this paper

Cite this paper

Lötjönen, J., Antila, K., Lamminmäki, E., Koikkalainen, J., Lilja, M., Cootes, T. (2005). Artificial Enlargement of a Training Set for Statistical Shape Models: Application to Cardiac Images. In: Frangi, A.F., Radeva, P.I., Santos, A., Hernandez, M. (eds) Functional Imaging and Modeling of the Heart. FIMH 2005. Lecture Notes in Computer Science, vol 3504. Springer, Berlin, Heidelberg. https://doi.org/10.1007/11494621_10

Download citation

  • DOI: https://doi.org/10.1007/11494621_10

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-26161-2

  • Online ISBN: 978-3-540-32081-4

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics