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Regularized Sliced Inverse Regression with Applications in Classification

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Data Analysis, Classification and the Forward Search

Abstract

Consider the problem of classifying a number of objects into one of several groups or classes based on a set of characteristics. This problem has been extensively studied under the general subject of discriminant analysis in the statistical literature, or supervised pattern recognition in the machine learning field. Recently, dimension reduction methods, such as SIR. and SAVE, have been used for classification purposes. In this paper we propose a regularized version of the SIR. method which is able to gain information from both the structure of class means and class variances. Furthermore, the introduction of a shrinkage parameter allows the method to be applied in under-resolution problems, such as those found in gene expression microarray data. The REGSIR method is illustrated on two different classification problems using real data sets.

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References

  • COOK, R.D. and YIN, X. (2001): Dimension Reduction and Visualization in Discriminant Analysis (with discussion). Australian and New Zealand Journal of Statistics, 43, 147–199.

    Article  MATH  Google Scholar 

  • COOK, R.D. and WEISBERG, S. (1991): Discussion of Li (1991). Journal of the American Statistical Association, 86, 328–332.

    Article  Google Scholar 

  • DUDOIT, S., FRIDLYAND, J. and SPEED, T.P. (2002): Comparison of Discrimination Methods for the Classification of Tumors Using Gene Expression Data. Journal of the American Statistical Association, 97, 77–87.

    Article  MATH  Google Scholar 

  • FRIEDMAN, J. H. (1989): Regularized Discriminant Analysis. Journal of the American Statistical Association, 84, 165–175.

    Article  Google Scholar 

  • KHAN, J., WEI, J.S., RINGNER, M., SAAL, L.H., LADANYI, M., WESTER-MANN, F., BERTHOLD, F., SCHWAB, M., ANTONESCU, C.R., PETERSON, C. and MELTZER, P.S. (2001): Classification and Diagnostic Prediction of Cancers Using Gene Expression Profiling and Artificial Neural Networks. Nature Medicine, 7, 673–679.

    Article  Google Scholar 

  • LI, K. C. (1991): Sliced Inverse Regression for Dimension Reduction (with discussion). Journal of the American Statistical Association, 86, 316–342.

    Article  MATH  Google Scholar 

  • LI, K. C. (2000): High Dimensional Data Analysis Via the SIR/PHD Approach. Unpublished manuscript.

    Google Scholar 

  • R Development Core Team (2005): R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing, Vienna, Austria. ISBN 3-900051-07-0, URL http://uuu.R-project.org.

    Google Scholar 

  • SAS Institute (1999): SAS/STAT User’s manual. Version 8.0, SAS Institute, Cary, NC, URL http: //v8doc.sas.com.

    Google Scholar 

  • TIBSHIRANI, R., HASTIE, T., NARASHIMAN, B. and CHU, G. (2002): Diagnosis of Multiple Cancer Types by Shrunken Centroids of Gene Expression. PNAS, 99, 6567–6572.

    Article  Google Scholar 

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Scrucca, L. (2006). Regularized Sliced Inverse Regression with Applications in Classification. In: Zani, S., Cerioli, A., Riani, M., Vichi, M. (eds) Data Analysis, Classification and the Forward Search. Studies in Classification, Data Analysis, and Knowledge Organization. Springer, Berlin, Heidelberg. https://doi.org/10.1007/3-540-35978-8_7

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