Skip to main content

Genetic markers for the analysis of variability and for production of specific diagnostic sequences in fumonisin-producing strains of Fusarium verticillioides

  • Chapter
Molecular Diversity and PCR-detection of Toxigenic Fusarium Species and Ochratoxigenic Fungi

Abstract

Fusarium verticillioides (Gibberella moniliformis, Gibberella fujikuroi mating population A) is the main source of fumonisins, a group of toxins which contaminates commodities, causing chronic and acute diseases in humans and animals. Fumonisins are produced during colonisation and infection of host plants even when disease symptoms are not recognisable. Early detection and control of F. verticillioides is crucial to prevent fumonisins from entering the food chain. DNA-based strategies have been used to search for markers to develop sensitive, robust and specific diagnostic assays, mainly based on PCR. The different approaches used, based either on DNA markers unrelated to fumonisin production or on information about the genes involved in fumonisin production, are described and discussed. The ability of these methods to discriminate between the two populations occurring within F. verticillioides, fumonisin-producing and fumonisin non-producing strains, is also addressed.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 84.99
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 109.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 109.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  • Abbas HK, Tanaka T, Duke SO, Porter JK, Wray EM, Hodges L, Sessions AE, Wang E, Merrill AH Jr. and Riley RT (1994) Fumonisin-and AAL-toxin-induced disruption of sphingolipid metabolism with accumulation of free sphingoid bases. Plant Physiology 106: 1085–1093.

    CAS  PubMed  Google Scholar 

  • Amoah BK, Mac Donald MV, Rezanoor N and Nicholson P (1996) The use of random amplified polymorphic DNA technique to identify mating groups in Fusarium section Liseola. Plant Pathology 45: 115–125.

    Article  Google Scholar 

  • Asai T, Stone JM, Heard JE, Kovtun Y, Yorgey P, Sheen J and Ausubel FM (2000) Fumonisin B1-induced cell death in Arabidopsis protoplasts requires jasmonate-, ethylene-, and salicylate-dependent signalling pathways. The Plant Cell 12: 1823–1836.

    CAS  PubMed  Google Scholar 

  • Bacon CW and Hinton DM (1996) Symptomless endophytic colonisation of maize by Fusarium moniliforme. Canadian Journal of Botany 74: 1195–1202.

    Article  Google Scholar 

  • Benyon FHL, Burges LW and Sharp PJ (2000) Molecular genetic investigations and reclassification of Fusarium species in sections Fusarium and Roseum. Mycological Research 104: 1164–1174.

    Article  CAS  Google Scholar 

  • Bezuidenhout SC, Gelderblom WCA, Gorst-Allman CP, Horak RM, Marasas WFO, Spiteller G and Vleggaar R (1988) Structure elucidation of the fumonisins, mycotoxins from Fusarium moniliforme. Journal of the Chemical Society 1988: 743–745.

    Google Scholar 

  • Bluhm BH, Flaherty JE, Cousin MA and Woloshuk CP (2002) Multiplex polymerase chain reaction assay for the differential detection of trichothecene-and fumonisin-producing species of Fusarium in cornmeal. Journal of Food Protection 65: 1955–1961.

    CAS  PubMed  Google Scholar 

  • Brandwagt BF, Kneppers TJ, Nijkamp HJ and Hille J (2002) Overexpression of the tomato Asc-1 gene mediates high insensitivity to AAL toxins and fumonisin Bl in tomato hairy roots and confers resistance to Alternaria alternata f. sp. lycopersici in Nicotiana umbratica plants. Molecular Plant Microbe Interactions 15: 35–42.

    Article  CAS  PubMed  Google Scholar 

  • Butchko RAE, Plattner RD and Proctor RH (2003) FUM9 is required for C-5 hydroxylation of fumonisins and complements the meitotically defined fum3 locus in Gibberella moniliformis. Applied and Environmental Microbiology 69: 6935–6937.

    Google Scholar 

  • Desjardins AE, Hohn TM and McCornick P (1993) Trichothecene biosynthesis in Fusarium species: Chemistry, genetics and significance. Microbiological Reviews 57: 595–604.

    Google Scholar 

  • Desjardins AE, Plattner RD and Proctor RH (1996) Linkage among genes responsible for fumonisin biosynthesis in Gibberella fujikuroi mating population A. Applied and Environmental Microbiology 62: 2571–2576.

    CAS  PubMed  Google Scholar 

  • Donaldson GC, Ball LA, Axelrood PE and Glass NL (1995) Primer sets developed to amplify conserved genes from filamentous ascomycetes are useful in differentiating Fusarium species associated with conifers. Applied and Environmental Microbiology 61: 1331–1340.

    CAS  PubMed  Google Scholar 

  • Doohan FM, Weston G, Rezanoor HN, Parry DW and Nicholson P (1999) Development and use of a reverse transcription-PCR assay to study expression of TriS by Fusarium species in vitro and in planta. Applied and Environmental Microbiology 65: 3850–3854.

    CAS  PubMed  Google Scholar 

  • Edel V, Steinberg C, Gautheron N and Alabouvette C (1997) Populations of non-pathogenic Fusarium oxysporum associated with roots of four plant species compared to soilborne populations. Phytopathology 87: 693–697.

    Article  CAS  PubMed  Google Scholar 

  • Edwards SG, Pirgozliev SR, Hare MC and Jenkinson P (2001) Quantification of trichothecene-producing Fusarium species in harvested grain by competitive PCR to determine efficacies of fungicides against Fusarium head blight of winter wheat. Applied and Environmental Microbiology 67: 1575–1580.

    Article  CAS  PubMed  Google Scholar 

  • Edwards SG, O’Callaghan J and Dobson ADW (2002) PCRbased detection and quantification of mycotoxigenic fungi. Mycological Research 106: 1005–1025.

    Article  CAS  Google Scholar 

  • Gelderblom WCA, Jaskiewicz K, Marasas WF, Thiel PG, Horak RM, Vleggaar R and Kriek NPJ (1988) Fumonisins: Novel mycotoxins with cancer-promoting activity produced by Fusarium moniliforme. Applied and Environmental Microbiology 54: 1806–1811.

    CAS  PubMed  Google Scholar 

  • Guidot A, Lumini E, Debaud JC and Marmeisse R (1999) The nuclear ribosomal DNA intergenic spacer as a target sequence to study intraspecific diversity of the ectomycorrhizal basidiomycete Hebeloma cylindrosporum directly on Pinus root systems. Applied and Environmental Microbiology 65: 903–909.

    CAS  PubMed  Google Scholar 

  • Harrison LR, Colvin BM, Greene JT, Newman LE and Cole JR (1990) Pulmonary edema and hydrothorax in swine produced by fumonisin B1, a toxic metabolite of Fusarium moniliforme. Journal of Veterinary Diagnostic Investigation 2: 217–221.

    Article  CAS  PubMed  Google Scholar 

  • Hillis DM and Dixon MT (1991) Ribosomal DNA: Molecular evolution and phylogenetic inference. Quarterly Review of Biology 66: 411–453.

    Article  CAS  PubMed  Google Scholar 

  • Jiménez M, Rodriguez S, Mateo JJ, Gil JV and Mateo R (2000) Characterization of Gibberella fujikuroi complex isolates by fumonisin B-1 and B-2 analysis and by RAPD and restriction analysis of PCR-amplified transcribed spacers of ribosomal DNA. Systematic and Applied Microbiology 23: 546–555.

    Article  PubMed  Google Scholar 

  • Keller SE, Sullivan TM and Chirtel S (1997) Factors affecting the growth of Fusarium proliferatum and the production of fumonisin B1: Oxygen and pH. Journal of Industrial Microbiology and Biotechnology 19: 305–309.

    Article  CAS  PubMed  Google Scholar 

  • Leissner CEW, Niessen L and Vogel RF (1997) Use of AFLP technique for the identification and discrimination of Fusarium graminearum. Cereal Research Communications 25: 555–556.

    Google Scholar 

  • Leslie JF (1995) Gibberella fujikuroi: Available populations and variable traits. Canadian Journal of Botany 73: 5282–5291.

    Article  Google Scholar 

  • Linnemannstons P, Schulte J, del Mar Prado M, Proctor RH, Avalos J and Tudzynski B (2002) The polyketide synthase gene pks4 from Gibberella fujikuroi encodes a key enzyme in the biosynthesis of the red pigment bikaverin. Fungal Genetics and Biology 37: 134–148.

    Article  CAS  PubMed  Google Scholar 

  • Marasas WF, Kellerman TS, Gelderblom WC, Coetzer JA, Thiel PG and van der Lugt JJ (1988) Leukoencephalomalacia in a horse induced by fumonisin B1 isolated from Fusarium moniliforme. Onderstepoort Journal of Veterinary Research 55: 197–203.

    CAS  PubMed  Google Scholar 

  • Martin RR, James D and Lévesque CA (2000) Impacts of molecular diagnostic technologies on plant disease management. Annual Review of Phytopathology 38: 207–239.

    Article  CAS  PubMed  Google Scholar 

  • Mirete, S, Errasquín, E, Gonzalez-Jaén, MT and Vazquez, C (2002) Analysis of genes related with fumonisin production in species of Gibberella fujikuroi species complex. Seventh European Seminar on Fusarium-Mycotoxins, Taxonomy and Pathogenicity. Poznan (Poland): 4–7 September 2002.

    Google Scholar 

  • Mirete S, Patino B, Vazquez C, Jiménez M, Hinojo MJ, Soldevilla C and Gonzalez-Jaén MT (2003) Fumonisin production by Gibberella fujikuroi strains from Pious species. International Journal of Food Microbiology 89: 213–221.

    Article  CAS  PubMed  Google Scholar 

  • Mirete S, Vazquez C, Mulè G, Jurado, M and Gonzalez-Jaén MT (2004) Differentiation of Fusarium verticillioides from banana fruits by IGS and EF-1 a sequence analysis. European Journal of Plant Pathology 110: 515–523.

    Article  CAS  Google Scholar 

  • Möller EM, Chelkowski J and Geiger HH (1999) Species-specific PCR assays for the fungal pathogens Fusarium moniliforme and Fusarium subglutinans and their application to diagnose maize ear rot disease. Journal of Phytopathology 147: 497–508.

    Article  Google Scholar 

  • Murillo I, Cavallarin L and San Segundo B (1998) The development of a rapid assay for the detection of Fusarium moniliforme. European Journal of Plant Pathology 104: 301311.

    Google Scholar 

  • Nelson PE, Desjardins AE and Plattner RD (1993) Fumonisins, mycotoxins produced by Fusarium species: Biology, chemistry, and significance. Annual Review of Phytopathology 31: 233–252.

    Google Scholar 

  • Niessen ML and Vogel RF (1998) Group specific PCRdetection of potential trichothecene-producing Fusariumspecies in pure cultures and cereal samples. Systematic and Applied Microbiology 2F 618–631.

    Article  Google Scholar 

  • O’Donnell K, Cigelnik E and Nirenberg HI (1998) Molecular systematics and phylogeography of the Gibberella fujikuroi species complex. Mycologia 90: 465–493.

    Article  Google Scholar 

  • Patifio B, Mirete S, Gonzalez-Jaén MT, Mulé G, Rodriguez T and Vazquez C. (2004) PCR detection assay of the fumonisin producing Fusarium verticillioides strains. Journal of Food Protection.

    Google Scholar 

  • Proctor RH, Desjardins AE, Plattner RD and Hohn TM (1999) A polyketide synthase gene required for biosynthesis of fumonisin mycotoxins in Gibberella fujikuroi mating population A. Fungal Genetics and Biology 27: 100–112.

    Article  CAS  PubMed  Google Scholar 

  • Proctor RH, Brown DW, Plattner RD and Desjardins AE (2003) Co-expression of 15 contiguous genes delineates a fumonisin biosynthetic gene cluster in Gibberella moniliformis. Fungal Genetics and Biology 38: 237–249.

    Article  CAS  PubMed  Google Scholar 

  • Rheeder JP, Marasas WFO and Vismer HF (2002) Production of fumonisin analogues by Fusarium species. Applied and Environmental Microbiology 68: 2101–2105.

    Article  CAS  PubMed  Google Scholar 

  • Schlacht UF, Moller EM and Geiger HG (1997) Genetic diversity of Gibberella fujikuroi isolates from different geographic origins. Proceedings of the Fifth European Fusarium Seminar. Cereal Research Communications 25: 557–600.

    Google Scholar 

  • Seo J, Proctor RH and Plattner RD (2001) Characterization of four clustered and coregulated genes associated with fumonisin biosynthesis in Fusarium verticillioides. Fungal Genetics and Biology 34: 155–165.

    Article  CAS  PubMed  Google Scholar 

  • Shier WG, Abbas HK and Mirocha CJ (1991) Toxicity of the mycotoxins fumonisin B1 and B2 and Alternaria alternata f.sp. lycopersici toxin ( AAL) in cultured mammalian cells. Mycopathologia 116: 97–104.

    Article  CAS  PubMed  Google Scholar 

  • Shim WB and Woloshuk CP (1999) Nitrogen repression of fumonisin B1 biosynthesis in Gibberella fujikuroi. FEMS Microbiological Letters 177: 109–116.

    Article  CAS  Google Scholar 

  • Shim WB and Woloshuk CP (2001) Regulation of fumonisin B i biosynthesis and conidiation in Fusarium verticillioides by a cyclin-like (C-Type) gene, FCCJ. Applied and Environmental Microbiology 67: 1607–1612.

    Article  CAS  PubMed  Google Scholar 

  • Steenkamp ET, Wingfield BD, Desjardins AE, Marasas WFO and Wingfield MJ (2002) Cryptic speciation in Fusarium subglutinans. Mycologia 94: 1032–1043.

    Article  CAS  PubMed  Google Scholar 

  • Tolleson WH, Couch LH, Melchior WB, Jenkins GR, Muskhelishvili M, Muskhelishvili L, McGarrity LJ, Domon O, Morris SM and Howard PC (1999) Fumonisin B1 induces apoptosis in cultured human keratinocytes through sphinganine accumulation and ceramide depletion. International Journal of Oncology 14: 833–843.

    CAS  PubMed  Google Scholar 

  • Voigt K, Schleier S and Bruckner B (1995) Genetic variability in Gibberella fujikuroi and some related species of genus Fusarium based on random amplification of polymorphic DNA ( RAPD ). Current Genetics 27. 528–535.

    Article  CAS  PubMed  Google Scholar 

  • Wang E, Norred WP, Bacon CW, Riley RT and Merrill AH (1991) Inhibition of sphingolipid biosynthesis by fumonisins implications for diseases associated with Fusarium moniliforme. Journal of Biological Chemistry 266: 14486–14490.

    CAS  PubMed  Google Scholar 

  • Wang H, Li J, Bostock RM and Gilchrist DG (1996) Apoptosis: A functional paradigm for programmed plant cell death induced by a host-selective phytotoxin and invoked during development. The Plant Cell 8: 375–391.

    CAS  PubMed  Google Scholar 

  • Yoder OC and Turgeon BG (2001) Fungal genomics and pathogenicity. Current Opinion in Plant Biology 4: 315–321.

    Article  CAS  PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

G. Mulè J. A. Bailey B. M. Cooke A. Logrieco

Rights and permissions

Reprints and permissions

Copyright information

© 2004 Springer Science+Business Media Dordrecht

About this chapter

Cite this chapter

González-Jaén, M.T., Mirete, S., Patiño, B., López-Errasquín, E., Vázquez, C. (2004). Genetic markers for the analysis of variability and for production of specific diagnostic sequences in fumonisin-producing strains of Fusarium verticillioides . In: Mulè, G., Bailey, J.A., Cooke, B.M., Logrieco, A. (eds) Molecular Diversity and PCR-detection of Toxigenic Fusarium Species and Ochratoxigenic Fungi. Springer, Dordrecht. https://doi.org/10.1007/978-1-4020-2285-2_7

Download citation

  • DOI: https://doi.org/10.1007/978-1-4020-2285-2_7

  • Publisher Name: Springer, Dordrecht

  • Print ISBN: 978-90-481-6631-2

  • Online ISBN: 978-1-4020-2285-2

  • eBook Packages: Springer Book Archive

Publish with us

Policies and ethics