Skip to main content

Measurements of spectral optical properties and their relation to biogeochemical variables and processes in Crater Lake, Crater Lake National Park, OR

  • Chapter
Long-term Limnological Research and Monitoring at Crater Lake, Oregon

Part of the book series: Developments in Hydrobiology ((DIHY,volume 191))

Abstract

Spectral inherent optical properties (IOPs) have been measured at Crater Lake, OR, an extremely clear sub-alpine lake. Indeed Pure water IOPs are major contributors to the total IOPs, and thus to the color of the lake. Variations in the spatial distribution of IOPs were observed in June and September 2001, and reflect biogeochemical processes in the lake. Absorption by colored dissolved organic material increases with depth and between June and September in the upper 300 m. This pattern is consistent with a net release of dissolved organic materials from primary and secondary production through the summer and its photo-oxidation near the surface. Waters fed by a tributary near the lake’s rim exhibited low levels of absorption by dissolved organic materials. Scattering is mostly dominated by organic particulate material, though inorganic material is found to enter the lake from the rim following a rain storm. Several similarities to oceanic oligotrophic regions are observed: (a) The Beam attenuation correlates well with particulate organic material (POM) and the relationship is similar to that observed in the open ocean. (b) The specific absorption of colored dissolved organic material has a value similar to that of open ocean humic material. (c) The distribution of chlorophyll with depth does not follow the distribution of particulate organic material due to photo-acclimation resulting in a subsurface pigment maximum located about 50 m below the POM maximum.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 129.00
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 169.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  • Bishop, J. K. B., 1999. Transmissometer measurement of POC. Deep-Sea Research I 46: 353–369.

    Article  CAS  Google Scholar 

  • Blough, N. V. & S. A. Green, 1995. Spectroscopic characterization and remote sensing of non living organic matter. In Zepp R. G. & C. Sonntag (eds), The Role of Non-living Organic Matter in the Earth’s Carbon Cycle. Willey, Chichester: 23–45.

    Google Scholar 

  • Boss, E. & W. S. Pegau, 2001. The relationship of light scattering at an angle in the backward direction to the backscattering coefficient. Applied Optics 40: 5503–5507.

    PubMed  CAS  Google Scholar 

  • Boss, E., W. S. Pegau, W. D. Gardner, J. R. V. Zaneveld, A. H. Barnard, M. S. Twardowski, G. C. Chang & T. D. Dickey, 2001a. The spectral particulate attenuation and particle size distribution in the bottom boundary layer of a continental shelf. Journal of Geophysical Research 106: 9509–9516.

    Article  Google Scholar 

  • Boss, E., M. S. Twardowski & S. Herring, 2001b. The shape of the particulate beam attenuation spectrum and its relaton to the size distribution of oceanic particles. Applied Optics 40: 4885–4893.

    PubMed  CAS  Google Scholar 

  • Boss, E., W. S. Pegau, M. Lee, M. S. Twardowski, E. Shybanov, G. Korotaev & F. Baratange, 2004. The particulate backscattering ratio at LEO 15 and its use to study particles composition and distribution. Journal of Geophysical Research 109, C0101410.1029/2002JC001514.

    Google Scholar 

  • Bricaud, A., M. Babin, A. Morel & H. Claustre, 1995. Variability in the chlorophyll-specific absorption coefficients of natural phytoplankton: analysis and parameterization. Journal of Geophysical Research (C — Oceans) 100: 13,321–13,332.

    Google Scholar 

  • Bukata, R. P., J. H. Jerome, K. Y. Kondratyev & D. V. Pozdnyakov, 1995. Optical Properties and Remote Sensing of Inland and Coastal Waters. CRC Press, Boca Raton, Florida.

    Google Scholar 

  • Davis, R. F., C. C. Moore, J. R. V. Zaneveld & J. M. Napp, 1997. Reducing the effects of fouling on chlorophyll estimates derived from long-term deployments of optical instruments. Journal of Geophysical Research 102: 5851–5855.

    Article  CAS  Google Scholar 

  • Fennel, K. & E. Boss, 2003. Subsurface maxima of phytoplankton and chlorophyll—steady state solutions from a simple model. Limnology and Oceanography 48: 1521–1534.

    Article  Google Scholar 

  • Gardner, W. D., M. J. Richardson & W. O. Smith, 2000. Seasonal patterns of water column particulate organic carbon and fluxes in the Ross Sea, Antarctica. Deep-Sea Research II 47: 3423–3449.

    Article  CAS  Google Scholar 

  • Gordon, H. R., O. B. Brown, R. E. Evans, J. W. Brown, R. C. Smith, K. C. Baker & D. C. Clark, 1988. A semianalytic model of ocean color. Journal of Geophysical Research 96: 10909–10924.

    Google Scholar 

  • Gunderson, J. S., W. D. Gardner, M. J. Richardson & I. D. Walsh, 1998. Effects of monsoons on the seasonal and spatial distribution of POC and chlorophyll in the Arabian Sea. Deep-Sea Research II 45: 2103–2132.

    Article  Google Scholar 

  • Hargreaves, B. R., S. F. Gardiner, M. W. Buktenica, R. W. Collier, E. Urbach & G. L. Larson, 2007. Ultraviolet radiation and bio-optics in Crater Lake, Oregon. Hydrobiologia 574: 107–140.

    Article  Google Scholar 

  • Kitchen, J. C. & J. R. Zaneveld, 1990. On the noncorrelation of the vertical structure of light scattering and chlorophyll a in case I waters. Journal of Geophysical Research 95: 20237–20246.

    Google Scholar 

  • Klimasauskas, E., C. Bacon & J. Alexander, 2002. Mount Mazama and Crater Lake: Growth and Destruction of a Cascade Volcano U.S. Geological Survey Fact Sheet 092-02.

    Google Scholar 

  • Maffione, R. A. & D. R. Dana, 1997. Instruments and methods for measuring the backward-scattering coefficient of ocean waters. Applied Optics 36: 6057–6067.

    PubMed  CAS  Google Scholar 

  • McIntire, C. D., G. L. Larson, R. E. Truitt & M. K. Debacon, 1996. Taxonomic structure and productivity of phytoplankton assemblages in Crater Lake, Oregon. Journal of Lake and Reservoir Management 12: 259–280.

    Article  Google Scholar 

  • Mobley, C. D., 1994. Light and Water: Radiative Transfer in Natural Waters. Academic Press, San Diego.

    Google Scholar 

  • Moore, C., E. J. Bruce, W. S. Pegau & A. D. Weideman, 1997. WET Labs ac-9: field calibration protocol, deployment techniques, data processing, and design improvements. “Ocean Optics XII”, Proceedings of the Society of Photo Optics Instrumentation Engineers 2963: 725–730.

    Google Scholar 

  • Morel, A., 1973. Diffusion de la lumiere par les eaux de mer. Resultat experimentaux et approch theorique. In Agard Lecture Series 61 on Optics of the Sea∼Advisory Group for Aerospace Research and Development; NATO, London: 3.1.1–76.

    Google Scholar 

  • Morel, A., 1974. Optical properties of pure water and pure sea water. In Jerlov, N. G. & E. S. Nielsen (eds), Optical Aspects of Oceanography. Academic Press, NewYork.

    Google Scholar 

  • Pettit, E., 1936. On the color of Crate Lake water. Proceedings, National Academy of Science 22: 139–146.

    Article  CAS  Google Scholar 

  • Smith, R. C. & K. S. Baker, 1981. Optical properties of the clearest natural waters (200–800 nm). Applied Optics 20: 177–184.

    Article  CAS  PubMed  Google Scholar 

  • Sosik, H. M. & B. G. Mitchell, 1995. Light absorption by phytoplankton, photosynthetic pigments and detritus in the California Current System. Deep Sea Research 42: 1717–1728.

    Article  Google Scholar 

  • Spinrad, R. W. & J. R. V. Zaneveld, 1982. An analysis of the optical features of the near-bottom and bottom nepholoid layers in the area of the Scotian Rise. Journal of Geophysical Research 87: 9553–9561.

    Article  Google Scholar 

  • Twardowski, M. S., J. M. Sullivan, P. L. Donaghay & J. R. V. Zaneveld, 1999. Microscale quantification of the absorption by dissolved and particulate material in coastal waters with an ac-9. Journal of Atmospheric Oceanic Technology 16: 691–707.

    Article  Google Scholar 

  • Twardowski, M. S., E. Boss, J. B. Macdonald, W. S. Pegau, A. H. Barnard & J. R. V. Zaneveld, 2001. A model for estimating bulk refractive index from the optical backscattering ratio and the implications for understanding particle composition in Case I and Case II waters. Journal of Geophysical Research 106: 14129–14142.

    Article  CAS  Google Scholar 

  • Urbach, E., K. L. Vergin, L. Young, A. Morse, G. L. Larson & S. J. Giovannoni, 2001. Unusual bacterioplankton community structure in ultra-oligotrophic Crater Lake. Limnology and Oceanography 46: 557–572.

    Article  CAS  Google Scholar 

  • Zaneveld, J. R. V., J. C. Kitchen & C. C. Moore, 1994. Scattering error correction of reflecting tube absorption meters. In Ackleson, S. (ed.), Ocean Optics XII, Proc. SPIE 2258: 44–55.

    Google Scholar 

  • Zaneveld, J. R. V., S. Pegau & J. L. Mueller, 2003. Volume scattering function and backscattering coefficients: instruments, characterization, field measurements and data analysis protocols. In Mueller, J. L., G. S. Fargion & C. R. McClain (eds.), Ocean Optics Protocols for Satellite Ocean Color Sensor Validation, Revision 4, Volume IV: Inherent Optical Properties: Instruments, Characterizations, Field Measurements and Data Analysis Protocols, NASA Tech. Memo., 2003-211621/Rev4-Vol.IV. Greenbelt: NASA Goddard Space Flight Center: 65–76.

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Emmanuel S. Boss .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2007 Springer Science+Business Media B.V.

About this chapter

Cite this chapter

Boss, E.S., Collier, R., Pegau, W.S., Larson, G., Fennel, K. (2007). Measurements of spectral optical properties and their relation to biogeochemical variables and processes in Crater Lake, Crater Lake National Park, OR. In: Larson, G.L., Collier, R., Buktenica, M.W. (eds) Long-term Limnological Research and Monitoring at Crater Lake, Oregon. Developments in Hydrobiology, vol 191. Springer, Dordrecht. https://doi.org/10.1007/978-1-4020-5824-0_9

Download citation

Publish with us

Policies and ethics