Skip to main content

Finding a Path for Segmentation Through Sequential Learning

  • Conference paper
  • First Online:
Information Processing in Medical Imaging (IPMI 2015)

Part of the book series: Lecture Notes in Computer Science ((LNIP,volume 9123))

Included in the following conference series:

  • 4919 Accesses

Abstract

Sequential learning techniques, such as auto-context, that applies the output of an intermediate classifier as contextual features for its subsequent classifier has shown impressive performance for semantic segmentation. We show that these methods can be interpreted as an approximation technique derived from a Bayesian formulation. To improve the effectiveness of applying this approximation technique, we propose a new sequential learning approach for semantic segmentation that solves a segmentation problem by breaking it into a series of simplified segmentation problems. Sequentially solving each of the simplified problems along the path leads to a more effective way for solving the original segmentation problem. To achieve this goal, we also propose a learning-based method to generate simplified segmentation problems by explicitly controlling the complexities of the modeling classifiers. We report promising results on the 2013 SATA canine leg muscle segmentation dataset.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 39.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 54.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Asman, A., Akhondi-Asl, A., Wang, H., Tustison, N., Avants, B., Warfield, S.K., Landman, B.: MICCAI 2013 segmentation algorithms, theory and applications (SATA) challenge results summary. In: MICCAI 2013 Challenge Workshop on Segmentation: Algorithms, Theory and Applications. Springer (2013)

    Google Scholar 

  2. Avants, B., Epstein, C., Grossman, M., Gee, J.: Symmetric diffeomorphic image registration with cross-correlation: evaluating automated labeling of elderly and neurodegenerative brain. Med. Image Anal. 12(1), 26–41 (2008)

    Article  Google Scholar 

  3. Cohen, W.W., Carvalho, V.R.: Stacked sequential learning. In: Proceedings of the 19th International Joint Conference on Artificial Intelligence, Edinburgh, Scotland, pp. 671–676 (2005)

    Google Scholar 

  4. Freund, Y., Schapire, R.E.: A desicion-theoretic generalization of on-line learning and an application to boosting. In: Vitányi, P.M.B. (ed.) EuroCOLT 1995. LNCS, vol. 904, pp. 23–37. Springer, Heidelberg (1995)

    Chapter  Google Scholar 

  5. Heckemann, R., Hajnal, J., Aljabar, P., Rueckert, D., Hammers, A.: Automatic anatomical brain MRI segmentation combining label propagation and decision fusion. NeuroImage 33, 115–126 (2006)

    Article  Google Scholar 

  6. Montillo, A., Shotton, J., Winn, J., Iglesias, J.E., Metaxas, D., Criminisi, A.: Entangled decision forests and their application for semantic segmentation of CT images. In: Székely, G., Hahn, H.K. (eds.) IPMI 2011. LNCS, vol. 6801, pp. 184–196. Springer, Heidelberg (2011)

    Chapter  Google Scholar 

  7. Munoz, D., Bagnell, J.A., Hebert, M.: Stacked hierarchical labeling. In: Daniilidis, K., Maragos, P., Paragios, N. (eds.) ECCV 2010, Part VI. LNCS, vol. 6316, pp. 57–70. Springer, Heidelberg (2010)

    Chapter  Google Scholar 

  8. Rohlfing, T., Brandt, R., Menzel, R., Russakoff, D.B., Maurer Jr., C.R.: Quo vadis, atlas-based segmentation? In: Suri, J.S., Wilson, D.L., Laxminarayan, S. (eds.) Volume III: Registration Models. Topics in Biomedical Engineering International Book Series, pp. 435–486. Springer, US (2005)

    Chapter  Google Scholar 

  9. Tu, Z., Bai, X.: Auto-context and its application to high-level vision tasks and 3D brain image segmentation. IEEE Trans. on PAMI 32(10), 1744–1757 (2010)

    Article  Google Scholar 

  10. Tu, Z., Zheng, S., Yuille, A., Reiss, A., Dutton, R., Lee, A., Galaburda, A., Dinov, I., Thompson, P., Toga, A.: Automated extraction of the cortical sulci based on a supervised learning approach. IEEE TMI 26(4), 541–552 (2007)

    Google Scholar 

  11. Van Leemput, K., Benner, T., Bakkour, A., Wiggins, G., Wald, L., Augustinack, J., Dickerson, B., Golland, P., Fischl, B.: Automated segmentation of hippocampal subfields from ultra-high resolution in vivo mri. Hippocampus 19, 549–557 (2009)

    Article  Google Scholar 

  12. Wang, H., Suh, J.W., Das, S., Pluta, J., Craige, C., Yushkevich, P.: Multi-atlas segmentation with joint label fusion. IEEE Trans. on PAMI 35(3), 611–623 (2013)

    Article  Google Scholar 

  13. Wang, H., Das, S.R., Suh, J.W., Altinay, M., Pluta, J., Craige, C., Avants, B.B., Yushkevich, P.A.: A learning-based wrapper method to correct systematic errors in automatic image segmentation: Consistently improved performance in hippocampus, cortex and brain. Neuroimage 55(3), 968–985 (2011)

    Article  Google Scholar 

  14. Wang, H., Yushkevich, P.A.: Multi-atlas segmentation with joint label fusion and corrective learning - an open source implementation. Front. neuroinformatics 7, 27 (2013)

    Google Scholar 

  15. Wolpert, D.H.: Stacked generalization. Neural netw. 5(2), 241–259 (1992)

    Article  MathSciNet  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Hongzhi Wang .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2015 Springer International Publishing Switzerland

About this paper

Cite this paper

Wang, H., Cao, Y., Syed-Mahmood, T.F. (2015). Finding a Path for Segmentation Through Sequential Learning. In: Ourselin, S., Alexander, D., Westin, CF., Cardoso, M. (eds) Information Processing in Medical Imaging. IPMI 2015. Lecture Notes in Computer Science(), vol 9123. Springer, Cham. https://doi.org/10.1007/978-3-319-19992-4_38

Download citation

  • DOI: https://doi.org/10.1007/978-3-319-19992-4_38

  • Published:

  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-319-19991-7

  • Online ISBN: 978-3-319-19992-4

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics