Volume 10, supplement issue 7, June 2009
UT-ORNL-KBRIN Bioinformatics Summit 2009
- Issue editors
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- Eric C Rouchka
- Julia Krushkal
19 articles in this issue
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Prediction of peptide drift time in ion mobility-mass spectrometry
Authors (first, second and last of 5)
- Bing Wang
- Steve Valentine
- Xiang Zhang
- Content type: Meeting abstract
- Open Access
- Published: 25 June 2009
- Article: A1
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Fuzzy rule based unsupervised approach for gene saliency
Authors
- Nishchal K Verma
- Pooja Agrawal
- Yan Cui
- Content type: Meeting abstract
- Open Access
- Published: 25 June 2009
- Article: A2
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Parallelized pairwise sequence alignment using CUDA on multiple GPUs
Authors
- Sungbo Jung
- Content type: Meeting abstract
- Open Access
- Published: 25 June 2009
- Article: A3
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Visualizing and sharing results in bioinformatics projects: GBrowse and GenBank exports
Authors (first, second and last of 10)
- Elissaveta G Arnaoudova
- Philip J Bowens
- Chris L Schardl
- Content type: Meeting abstract
- Open Access
- Published: 25 June 2009
- Article: A4
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LSI based framework to predict gene regulatory information
Authors
- Sujoy Roy
- Lijing Xu
- Ramin Homayouni
- Content type: Meeting abstract
- Open Access
- Published: 25 June 2009
- Article: A5
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A systematic study on latent semantic analysis model parameters for mining biomedical literature
Authors (first, second and last of 4)
- Mohammed Yeasin
- Haritha Malempati
- Mohammad Shahed Sorower
- Content type: Meeting abstract
- Open Access
- Published: 25 June 2009
- Article: A6
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Reconstructing the virulome of the human pathogen Streptococcus pyogenes using NMPDR subsystems-based annotation
Authors
- Ramy K Aziz
- Leslie K Mcneil
- Content type: Meeting abstract
- Open Access
- Published: 25 June 2009
- Article: A7
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Bioinformatics determination of ETEC signature genes as potential targets for molecular diagnosis and reverse vaccinology
Authors
- Heba M Amin
- Abdel-Gawad M Hashem
- Ramy K Aziz
- Content type: Meeting abstract
- Open Access
- Published: 25 June 2009
- Article: A8
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Bioinformatic analysis of gene regulation in Geobacter sulfurreducens
Authors (first, second and last of 12)
- Julia Krushkal
- Yanhua Qu
- Derek R Lovley
- Content type: Meeting abstract
- Open Access
- Published: 25 June 2009
- Article: A9
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Comparison of annotation terms between automated and curated E. coli K12 databases
Authors
- ReddySailaja Marpuri
- Claire A Rinehart
- Content type: Meeting abstract
- Open Access
- Published: 25 June 2009
- Article: A10
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Slim-Prim: an integrated data system for clinical and translational research
Authors (first, second and last of 7)
- Teeradache Viangteeravat
- Ian Brooks
- Chanchai McDonald
- Content type: Meeting abstract
- Open Access
- Published: 25 June 2009
- Article: A11
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Microarray analysis and quantitative real-time PCR validation of gene expression during auditory hair cell regeneration in zebrafish (Danio rerio)
Authors (first, second and last of 6)
- Julie B Schuck
- Chia-Hui Lin
- Michael E Smith
- Content type: Meeting abstract
- Open Access
- Published: 25 June 2009
- Article: A12
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Extensive parent-of-origin genetic effects on fetal growth
Authors (first, second and last of 7)
- Ronald M Adkins
- Julia Krushkal
- Everett F Magann
- Content type: Meeting abstract
- Open Access
- Published: 25 June 2009
- Article: A13
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Molecular dissection of cardiac hypertrophy induced by interleukin-18
Authors (first, second and last of 5)
- Sirshendu Majumdar
- I Maria Johnson
- Rajendra Raghow
- Content type: Meeting abstract
- Open Access
- Published: 25 June 2009
- Article: A14
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Transcriptional profiling of CD4 T-lymphocytes reveals abnormal gene expression in young prediabetic NOD mice
Authors (first, second and last of 4)
- Dorothy N Kakoola
- Nataliya I Lenchik
- Ivan C Gerling
- Content type: Meeting abstract
- Open Access
- Published: 25 June 2009
- Article: A15
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Utilizing a mixed model approach to compare the lactating rat transcriptome against age-matched control virgins
Authors (first, second and last of 7)
- Antony T Athippozhy
- Liping Huang
- Mary Vore
- Content type: Meeting abstract
- Open Access
- Published: 25 June 2009
- Article: A16
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Motif Tool Manager: a web-based platform for motif discovery
Authors
- Vinhthuy Phan
- Content type: Meeting abstract
- Open Access
- Published: 25 June 2009
- Article: A17
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Flipping NextGen: using biological systems to characterize NextGen sequencing technologies
Authors
- Jarret Glasscock
- Ryan Richt
- Matt Hickenbotham
- Content type: Meeting abstract
- Open Access
- Published: 25 June 2009
- Article: A18