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Cationic Electrophoresis and Eastern Blotting

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Western Blotting

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1312))

Abstract

Denaturing, discontinuous electrophoresis in the presence of SDS has become a standard method for the protein scientist. However, there are situations where this method produces suboptimal results. In these cases electrophoresis in the presence of positively charged detergents like cetyltrimethylammonium bromide (CTAB) may work considerably better. Methods for electrophoresis, staining, and blotting of such gels are presented.

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References

  1. Laemmli U (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227:680–685

    Article  CAS  PubMed  Google Scholar 

  2. Towbin H, Staehelin T, Gordon J (1979) Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheets: procedure and some applications. Proc Natl Acad Sci U S A 76:4350–4354

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  3. Dunn S (1986) Effects of the modification of transfer buffer composition and the renaturation of proteins in gels on the recognition of proteins on western blots by monoclonal antibodies. Anal Biochem 157:144–153

    Article  CAS  PubMed  Google Scholar 

  4. Shirahama K, Tsujii K, Takagi T (1974) Free boundary electrophoresis of sodium dodecyl sulphate-protein polypeptide complexes with special reference to SDS polyacrylamide gel electrophoresis. J Biochem 75:309–319

    CAS  PubMed  Google Scholar 

  5. Rabilloud T, Girardot V, Lawrence J-J (1996) One-and two dimensional histone separations in acidic gels: usefulness of methylene blue-driven photo-polymerisation. Electrophoresis 17:67–73

    Article  CAS  PubMed  Google Scholar 

  6. Panyim S, Thitipongpanich R, Supatimusro D (1977) A simplified gel electrophoretic system and its validity for molecular weight determinations of protein cetyltrimethylammonium complexes. Anal Biochem 81:320–327

    Article  CAS  PubMed  Google Scholar 

  7. Eley M, Burns P, Kannapell C, Campbell P (1979) Cetyltrimethylammonium bromide polyacrylamide gel electrophoresis: estimation of protein subunit molecular weights using cationic detergents. Anal Biochem 92:411–419

    Article  CAS  PubMed  Google Scholar 

  8. MacFarlane D (1983) Use of benzyldimethyl-n-hexadecylammonium chloride (“16-BAC”), a cationic detergent, in an acidic polyacrylamide gel electrophoresis system to detect base labile protein methylation in intact cells. Anal Biochem 132:231–235

    Article  CAS  PubMed  Google Scholar 

  9. Mócz G, Bálint M (1984) Use of cationic detergents for polyacrylamide gel electrophoresis in multiphasic buffer systems. Anal Biochem 143:283–292

    Article  PubMed  Google Scholar 

  10. Akin D, Shapira R, Kinkade J Jr (1985) The determination of molecular weights of biologically active proteins by cetyltrimethylammonium bromide polyacrylamide gel electrophoresis. Anal Biochem 145:170–176

    Article  CAS  PubMed  Google Scholar 

  11. Akins R, Levin P, Tuan R (1992) Cetyltrimethylammonium bromide discontinuous electrophoresis: Mr-based separation of proteins with retention of enzymatic activity. Anal Biochem 202:172–178

    Article  CAS  PubMed  Google Scholar 

  12. Hartinger J, Stenius K, Högemann D, Jahn R (1996) 16-BAC/SDS-PAGE: a two-dimensional gel electrophoresis system suitable for the separation of integral membrane proteins. Anal Biochem 240:126–133

    Article  CAS  PubMed  Google Scholar 

  13. Ornstein L (1962) Disk electrophoresis: I. Background and theory. Ann N Y Acad Sci 121:321–351

    Article  Google Scholar 

  14. Jovin T (1973) Multiphasic zone electrophoresis. I. Steady-state moving-boundary systems formed by different electrolyte combinations. Biochemistry 12:871–879

    Article  CAS  PubMed  Google Scholar 

  15. Jovin T (1973) Multiphasic zone electrophoresis. II. Design of integrated discontinuous buffer systems for analytical and preparative fractionation. Biochemistry 12:879–890

    Article  CAS  PubMed  Google Scholar 

  16. Jovin T (1973) Multiphasic zone electrophoresis. III. Further analysis and new forms of discontinuous buffer systems. Biochemistry 12:890–898

    Article  CAS  PubMed  Google Scholar 

  17. Jovin T (1973) Multiphasic zone electrophoresis. IV. Design and analysis of discontinuous buffer systems with a digital computer. Ann N Y Acad Sci 209:477–496

    Article  CAS  PubMed  Google Scholar 

  18. Chrambach A (1985) The practice of quantitative gel electrophoresis. VCH, Weinheim

    Google Scholar 

  19. Buxbaum E (2003) Cationic electrophoresis and electrotransfer of membrane glycoproteins. Anal Biochem 314:70–76

    Article  CAS  PubMed  Google Scholar 

  20. Pritchard D, Crawford C, Duce I, Behnke J (1985) Antigen stripping from the nematode epicuticle using the cationic detergent cetyltrimethylammonium bromide (CTAB). Parasite Immunol 7:575–585

    Article  CAS  PubMed  Google Scholar 

  21. Freedman D, Nutman T, Ottesen E (1988) Enhanced solubilization of immunoreactive proteins from Brugia malayi adult parasites using cetyltrimethylammonium bromide. Experim Parasitol 65:244–250

    Article  CAS  Google Scholar 

  22. Maki K, Sagara J, Kawai A (1991) A cationic detergent, cetyltrimethylammonium bromide (CTAB), selectively dissociates the intermediate filament of the fibroblast. Biochem Biophys Res Commun 175:768–774

    Article  CAS  PubMed  Google Scholar 

  23. Smith I, Cromie R, Stainsby K (1988) Seeing gel wells well. Anal Biochem 169:370–371

    Article  CAS  PubMed  Google Scholar 

  24. Lazar J, Taub F (1992) A highly sensitive method for detecting peroxidase in situ hybridization or immunohistochemical assays. In: Kessler C (ed) Nonradioactive labeling and detection of biomolecules. Springer, Berlin, pp 135–142

    Chapter  Google Scholar 

  25. Leong M, Fox G (1990) Luminescent detection of immunodot and Western blot. Meth Enzymol 184:442–451

    CAS  PubMed  Google Scholar 

  26. Rodbard D, Chrambach A (1971) Estimation of molecular radius, free mobility, and valence using polyacrylamide gel electrophoresis. Anal Biochem 40:95–134

    Article  CAS  PubMed  Google Scholar 

  27. Stellwagen N (1998) Apparent pore size of polyacrylamide gels. Electrophoresis 19:1542–1547

    Article  CAS  PubMed  Google Scholar 

  28. Kramer ML (2006) A new multiphasic buffer system for benzyldimethyl-n-hexadecylammonium chloride polyacrylamide gel electrophoresis of proteins providing efficient stacking. Electrophoresis 27(2):347–356 doi:10.1002/elps.200500563

  29. Heukeshoven J, Dernick R (1988) Improved silver staining procedure for fast staining in phastsystem development unit I. Staining of sodium dodecyl sulfate gels. Electrophoresis 9:28–32

    Article  CAS  PubMed  Google Scholar 

  30. Merril C, Goldman D, Sedman S, Ebert M (1981) Ultrasensitive stain for proteins in polyacrylamide gels shows regional variations in cerebrospinal fluid proteins. Science 211:1437–1438

    Article  CAS  PubMed  Google Scholar 

  31. Segrest J, Jackson R (1972) Molecular weight determination of glycoproteins by polyacrylamide gel electrophoresis in sodium dodecyl sulfate. Meth Enzymol 28:54–63

    Google Scholar 

  32. Thornton D, Holmes D, Sheehan J, Carlstedt I (1989) Quantitation of mucus glycoproteins blotted onto nitrocellulose membranes. Anal Biochem 182:160–164

    Article  CAS  PubMed  Google Scholar 

  33. Hancock K, Tsang V (1983) India ink staining of proteins on nitrocellulose paper. Anal Biochem 133:157–162

    Article  CAS  PubMed  Google Scholar 

  34. Hassan J, Feighery C, Whalan A (1987) Staining molecular weight markers on nitrocellulose using Ponceau S. J Clin Lab Immunol 24:104

    CAS  PubMed  Google Scholar 

  35. Moore M, Viselli S (2000) Staining and quantification of proteins transferred to polyvinylidene difluoride membranes. Anal Biochem 279:241–242

    Article  CAS  PubMed  Google Scholar 

  36. Rabilloud T, Strub J-M, Luche S, Dorsselaer AV, Lunardi J (2001) A comparison between Sypro ruby and rubidium (II) tris(bathophenanthroline disulfonate) as fluorescent stains for protein detection in gels. Proteomics 1:699–704

    Article  CAS  PubMed  Google Scholar 

  37. Buxbaum E (2012) Fluorescent staining of gels. Meth Mol Biol 869:5

    Google Scholar 

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Acknowledgement

This work was supported in part by Kuwait University grant MPB029.

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Correspondence to Engelbert Buxbaum Dr. rer. nat., Dipl. Biol. .

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Buxbaum, E. (2015). Cationic Electrophoresis and Eastern Blotting. In: Kurien, B., Scofield, R. (eds) Western Blotting. Methods in Molecular Biology, vol 1312. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-2694-7_19

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  • DOI: https://doi.org/10.1007/978-1-4939-2694-7_19

  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-2693-0

  • Online ISBN: 978-1-4939-2694-7

  • eBook Packages: Springer Protocols

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