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Evaluation of the Reliability of cDNA Microarray Technique

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Frontiers in Biochip Technology

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References

  1. Schena M., Shalon D., Davis R. W., Brown P. O. 1995, Quantitative Monitoring of Gene Expression Patterns with a Complementary DNA Microarray. Science, 270(20): 467–470.

    Google Scholar 

  2. Schena M., Shalon D., Heller R., Chai A., Brown P. O., Davis R.W. 1996, Parallel human genome analysis: Microarray based expression monitoring of 1000 genes. PNAS, 93: 10614–10619.

    Article  Google Scholar 

  3. Li Y., Qiu M. Y., Wu C. Q., Cao Y. Q., Tang R., Chen X., Shi X. Y., Hu Z. Q., Xie Y., Mao Y. M. 2000, Detection of Differentially Expressed Genes in Hepatocellular Carcinoma Using DNA Microarray. Acta Genetica Sinica (Chinese), 27(12): 1042–1048.

    Google Scholar 

  4. Shalon D., Smith S. J., Brown P. O. 1996, A DNA microarray system for analyzing complex DNA samples using two-color fluorescent probe hybridization. Genome Res, 6(7): 639–645.

    Google Scholar 

  5. Lee M. L., Kuo F. C., Whitmore G. A., Sklar J. 2000, Importance of replication in microarray gene expression studies: statistical methods and evidence from repetitive cDNA hybridizations. Proc Natl Acad Sci USA, 97(18): 9834–9839.

    Article  Google Scholar 

  6. LifeArray Chip Validation Study [EB/OL]. http://www.incyte.com

    Google Scholar 

  7. Chomczynski P., Sacchi N. 1987, Single-Step Method of RNA Isolation by Acid Guanidinium Thiocyanate-Phenol-Chloroform Extraction. Anal Biochem, 162:156–159.

    Article  Google Scholar 

  8. Raha S., Merante F., Proteau G., Reed J. K. 1990, Simultaneous isolation of total cellular RNA and DNA from tissue culture cells using phenol and lithium chloride. Genet Anal Tech Appl, 7(7): 173–177.

    Article  Google Scholar 

  9. Yang P., Otto C. M., Sheehan F. H. 1997, The effect of normalization in reducing variability in regional wall thickening. J Am Soc Echocardiogr, 10(3): 197–204.

    Article  Google Scholar 

  10. Eisen M. B., Spellman P. T., Brown P. O., Botstein D. 1998, Cluster Analysis and Display of Genome-Wide Expression Patterns. Proc Natl Acad Sci, 95: 14863–14868.

    Article  Google Scholar 

  11. Yue H., Eastman P. S., Wang B. B., Minor J., Doctolero M. H., Nuttall R. L., Stack R. Becker J. W., Montgomery J. R., Vainer M., Johnston R. 2001, An evaluation of the performance of cDNA microarrays for detecting changes in global mRNA expression. Nucleic Acids Res, 29: e41.

    Article  Google Scholar 

  12. Li Y., Li Y. L., Tang R., Xu H., Qiu M. Y., Chen Q., Chen J. X., Fu Z. R., Ying K., Xie Y., Mao Y. M. 2002, Discovery and analysis of hepatocellular carcinoma genes using cDNA microarrays. J Cancer Res Clin Oncol, 128: 369–379.

    Article  Google Scholar 

  13. Kuruvilla F. G., Park P. J., Schreiber S. L. 2002, Vector algebra in the analysis of genome-wide expression data. Genome Biol, 3: RESEARCH0011

    Google Scholar 

  14. Hsiao L. L., Jensen R. V., Yoshida T., Clark K. E., Blumenstock J. E., Gullans S. R. 2002, Correcting for signal saturation errors in the analysis of microarray data. Biotechniques, 32(2): 330–332, 334, 336.

    Google Scholar 

  15. Kothapalli R., Yoder S. J., Mane S., Loughran T. P. Jr. 2002, Microarray results: how accurate are they? BMC Bioinformatics, 3(1): 22

    Article  Google Scholar 

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Li, Y. et al. (2006). Evaluation of the Reliability of cDNA Microarray Technique. In: Xing, WL., Cheng, J. (eds) Frontiers in Biochip Technology. Springer, Boston, MA. https://doi.org/10.1007/0-387-25585-0_19

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  • DOI: https://doi.org/10.1007/0-387-25585-0_19

  • Publisher Name: Springer, Boston, MA

  • Print ISBN: 978-0-387-25568-2

  • Online ISBN: 978-0-387-25585-9

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