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Detecting Noun Phrases in Biomedical Terminologies: The First Step in Managing the Evolution of Knowledge

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Health Information Science (HIS 2014)

Part of the book series: Lecture Notes in Computer Science ((LNISA,volume 8423))

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Abstract

In order to identify variations between two or several versions of Clinical Practice Guidelines, we propose a method based on the detection of noun phrases. Currently, we are developing a comparison approach to extract similar and different elements between medical documents in French in order to identify any significant changes such as new medical terms or concepts, new treatments etc. In this paper, we describe a basic initial step for this comparison approach i.e. detecting noun phrases. This step is based on patterns constructed from six main medical terminologies used in document indexing. The patterns are constructed by using a Tree Tagger. To avoid a great number of generated patterns, the most relevant ones are selected that are able identify more than 80% of the six terminologies used in this study. These steps allowed us to obtain a manageable list of 262 patterns which have been evaluated. Using this list of patterns, 708 maximal noun phrases were found, with, 364 correct phrases which represent a 51.41% precision. However by detecting these phrases manually, 602 maximal noun phrases were found which represent a 60.47% recall and therefore a 55.57% F-measure. We attempted to improve these results by increasing the number of patterns from 262 to 493. A total of 729 maximal noun phrases were obtained, with 365 which were correct, and corresponded to a 50.07% precision, 60.63% recall and 54.85% F-measure.

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Merabti, A., Soualmia, L.F., Darmoni, S.J. (2014). Detecting Noun Phrases in Biomedical Terminologies: The First Step in Managing the Evolution of Knowledge. In: Zhang, Y., Yao, G., He, J., Wang, L., Smalheiser, N.R., Yin, X. (eds) Health Information Science. HIS 2014. Lecture Notes in Computer Science, vol 8423. Springer, Cham. https://doi.org/10.1007/978-3-319-06269-3_12

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  • DOI: https://doi.org/10.1007/978-3-319-06269-3_12

  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-319-06268-6

  • Online ISBN: 978-3-319-06269-3

  • eBook Packages: Computer ScienceComputer Science (R0)

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