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Machine Learning Techniques for Survival Time Prediction in Breast Cancer

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Artificial Intelligence: Methodology, Systems, and Applications (AIMSA 2018)

Abstract

The use of machine learning in disease prediction and prognosis is part of a growing trend of personalized and predictive medicine. Cancer studies are domain of active machine learning implementation in particular in sense of accuracy of cancer prognosis and prediction. The accuracy of survival time prediction in breast cancer is the main object of the study. Two major features for survival time prediction, based on clinical data are used: the created in the study tumor integrated clinical feature and Nottingham prognostic index. The applied machine learning methods aside with data normalisation and classification provide promising results for accuracy of survival time prediction. Results showed prepotency of the support vector regression modles - linear and decision tree regression models, for more accurate prediction of the survival time in breast cancer. Cross-validation, based on four parameters for error evaluation, confirms the results of the model performance concerning the accuracy of survival time prediction in breast cancer.

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References

  1. American Cancer Society: Cancer Statistics Center. http://cancerstatisticscenter.cancer.org. Accessed 25 May 2018

  2. Ivanova, D.: Big data analytics for early detection of breast cancer based on machine learning. AIP Conf. Proc. 1910(1), 060016 (2017). https://doi.org/10.1063/1.5014010

  3. Luo, J., Wu, M., Gopukumar, D., Zhao, Y.: Big data application in biomedical research and health care: a literature review. Biomed. Inform. Insights 8, 1–10 (2016). https://doi.org/10.4137/BII.S31559

    Article  Google Scholar 

  4. Cruz, J.A., Wishart, D.S.: Applications of machine learning in cancer prediction and prognosis. Cancer Inform. 2, 59–77 (2006)

    Article  Google Scholar 

  5. Weston, A.D., Hood, L.: Systems biology, proteomics, and the future of health care: toward predictive, preventative, and personalized medicine. J. Proteome Res. 3, 179–196 (2004)

    Article  Google Scholar 

  6. Hagerty, R.G., Butow, P.N., et al.: Communicating prognosis in cancer care: a systematic review of the literature. Ann. Oncol. 16(7), 1005–1053 (2005). https://doi.org/10.1093/annonc/mdi211

    Article  Google Scholar 

  7. Futschik, M., Michael, S.: Prediction of clinical behaviour and treatment for cancers. OMJ Appl. Bioinform. 2, 53–58 (2003)

    Google Scholar 

  8. Djebbari, A., Liu, Z., Phan, S., Famili, F.: International journal of computational biology and drug design (IJCBDD). In: 21st Annual Conference on Neural Information Processing Systems (2008)

    Google Scholar 

  9. Liu, Y.-Q., Wang, C., Zhang, L.: Decision tree based predictive models for breast cancer survivability on imbalanced data. In: 3rd International Conference on Bioinformatics and Biomedical Engineering, pp. 1–4 (2009). https://doi.org/10.1109/icbbe.2009.5162571

  10. Delen, D., et al.: Predicting breast cancer survivability: a comparison of three data mining methods. Artif. Intell. Med. 34(2), 113–127 (2005). https://doi.org/10.1016/j.artmed.2004.07.002

    Article  Google Scholar 

  11. Lisboa, H.W., Harris, P., et al.: A Bayesian neural network approach for modelling censored data with an application to prognosis after surgery for breast cancer. Artif. Intell. Med. 28(1), 1–25 (2003). https://doi.org/10.1016/S0933-3657(03)00033-2

    Article  Google Scholar 

  12. Seker, H., et al.: Assessment of nodal involvement and survival analysis in breast cancer patients using image cytometric data: statistical, neural network and fuzzy approaches. Anticancer Res. Int. J. Cancer Res. Treat. 22(1), 433–438 (2002)

    Google Scholar 

  13. Zhang, H., Guo, Y., Li, Q., George, T.J., Shenkman, E.A., Bian, J.: Data integration through ontology-based data access to support integrative data analysis: a case study of cancer survival. In: 2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM), Kansas City, MO, pp. 1300–1303 (2017). https://doi.org/10.1109/bibm.2017.8217849

  14. Rakha, E.A., Soria, D., Green, A.R., et al.: Nottingham Prognostic Index Plus (NPI+): a modern clinical decision making tool in breast cancer. Br. J. Cancer 110(7), 1688–1697 (2014). https://doi.org/10.1038/bjc.2014.120

    Article  Google Scholar 

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Acknowledgements

The presented work has been funded by the Bulgarian NSF within the “GloBIG: A Model of Integration of Cloud Framework for Hybrid Massive Parallelism and its Application for Analysis and Automated Semantic Enhancement of Big Heterogeneous Data Collections” project, Contract DN02/9 of 17.12.2016, and by the Sofia University SRF within the “Models for semantic integration of biomedical data” project, Contract 80-10-207/26.04.2018.

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Correspondence to Dimitar Vassilev .

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Mihaylov, I., Nisheva, M., Vassilev, D. (2018). Machine Learning Techniques for Survival Time Prediction in Breast Cancer. In: Agre, G., van Genabith, J., Declerck, T. (eds) Artificial Intelligence: Methodology, Systems, and Applications. AIMSA 2018. Lecture Notes in Computer Science(), vol 11089. Springer, Cham. https://doi.org/10.1007/978-3-319-99344-7_17

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  • DOI: https://doi.org/10.1007/978-3-319-99344-7_17

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