Skip to main content

Heterologous Expression of Proteins from Cold-Adapted Yeasts in Suitable Hosts: Methods and Applications

  • Chapter
  • First Online:
Cold-adapted Yeasts

Abstract

One of the prerequisites for the functional and structural characterisation of proteins is to obtain a sufficiently high amount of the protein sample. Recombinant protein expression systems are usually employed for the overproduction of proteins in cases where isolation from their native host is difficult. For each protein, a suitable expression system must be optimised to obtain the sample in a soluble, correctly folded conformation with high production yield. The recent discovery of psychrophilic yeasts and their potential in industrial applications have sparked interest in overexpression strategies for high-level expression of psychrophilic proteins. Here, we discuss some of the recent developments in the recombinant production of cold-adapted yeast proteins, particularly those from Glaciozyma antarctica PI12, in suitable heterologous hosts. Findings from our work, as well as from recent publications, are included.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 129.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 169.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  • Cereghino JL, Cregg JM (2000) Heterologous protein expression in the methylotrophic yeast Pichia pastoris. FEMS Microbiol Rev 24:45–66

    Article  PubMed  CAS  Google Scholar 

  • Correa A, Oppezzo P (2011) Tuning different expression parameters to achieve soluble recombinant proteins in E. coli: advantages of high-throughput screening. Biotechnol J 6:715–730

    Article  PubMed  CAS  Google Scholar 

  • Daly R, Hearn MTW (2005) Expression of heterologous proteins in Pichia pastoris: a useful experimental tool in protein engineering and production. J Mol Recognit 18:119–138

    Article  PubMed  CAS  Google Scholar 

  • Demain AL, Vaishnav P (2009) Production of recombinant proteins by microbes and higher organisms. Biotechnol Adv 27:297–306

    Article  PubMed  CAS  Google Scholar 

  • Domínguez A, Fermiñán E, Sánchez M, González FJ, Pérez-Campo FM, García S, Herrero AB, San Vicente A, Cabello J, Prado M, Iglesias FJ, Choupina A, Burguillo FJ, Fernández-Lago L, López MC (1998) Non-conventional yeasts as hosts for heterologous protein production. Int Microbiol 1:131–142

    PubMed  Google Scholar 

  • Fan Y, Zhang Y, Yang X, Pei X, Guo S, Pei Y (2007) Expression of a Beauveria bassiana chitinase (Bbchit1) in Escherichia coli and Pichia pastoris. Protein Expr Purif 56:93–99

    Article  PubMed  CAS  Google Scholar 

  • Ferrer M, Chernikova TN, Timmis KN, Golyshin PN (2004) Expression of a temperature-sensitive esterase in a novel chaperone-based Escherichia coli strain. Appl Environ Microbiol 70:4499–4504

    Article  PubMed  CAS  Google Scholar 

  • Fisher AC, Haitjema CH, Guarino C, Çelik E, Endicott CE, Reading CA, Merritt JH, Ptak AC, Zhang S, Delisa MP (2011) Production of secretory and extracellular N-linked glycoproteins in Escherichia coli. Appl Environ Microbiol 77:871–881

    Article  PubMed  CAS  Google Scholar 

  • Hashim NHF, Bharudin I, Nguong DLS, Higa S, Bakar FDA, Nathan S, Rabu A, Kawahara H, Illias RM, Najimudin N, Mahadi NM, Murad AMA (2013) Characterization of Afp1, an antifreeze protein from the psychrophilic yeast Glaciozyma antarctica PI12. Extremophiles 17:63–73

    Article  PubMed  CAS  Google Scholar 

  • Higgins DR, Cregg JM (1992) Pichia protocols: methods in molecular biology. Humana Press, Totowa

    Google Scholar 

  • Idicula-Thomas S, Balaji PV (2005) Understanding the relationship between the primary structure of proteins and its propensity to be soluble on overexpression in Escherichia coli. Protein Sci 14:582–592

    Article  PubMed  CAS  Google Scholar 

  • Inouye S, Sahara Y (2008) Soluble protein expression in E. coli cells using IgG-binding domain of protein A as a solubilizing partner in the cold induced system. Biochem Biophys Res Commun 376:448–453

    Article  PubMed  CAS  Google Scholar 

  • Jahic M, Wallberg F, Bollok M, Garcia P, Enfors S-O (2003) Temperature limited fed-batch technique for control of proteolysis in Pichia pastoris bioreactor cultures. Microb Cell Fact 2:6

    Article  PubMed  Google Scholar 

  • Kandror O, Goldberg AL (1997) Trigger factor is induced upon cold shock and enhances viability of Escherichia coli at low temperatures. Proc Natl Acad Sci USA 94:4978–4981

    Article  PubMed  CAS  Google Scholar 

  • Kandror O, Sherman M, Moerschell R, Goldberg AL (1997) Trigger factor associates with GroEL in vivo and promotes its binding to certain polypeptides. J Biol Chem 272:1730–1734

    Article  PubMed  CAS  Google Scholar 

  • Kataeva I, Chang J, Xu H, Luan C-H, Zhou J, Uversky VN, Lin D, Horanyi P, Liu ZJ, Ljungdahl LG, Rose J, Luo M, Wang B-C (2005) Improving solubility of Shewanella oneidensis MR-1 and Clostridium thermocellum JW-20 proteins expressed into Esherichia coli. J Proteome Res 4:1942–1951

    Article  PubMed  CAS  Google Scholar 

  • Kim YH, Han KY, Lee K, Lee J (2005) Proteome response of Escherichia coli fed-batch culture to temperature downshift. Appl Microbiol Biotechnol 68:786–793

    Article  PubMed  CAS  Google Scholar 

  • LaVallie ER, Diblasio EA, Kovacic S, Grant KL, Schendel PF, Mccoy JM (1993) A thioredoxin gene fusion expression system that circumvents inclusion body formation in the E. coli cytoplasm. Nat Biotechnol 11:187–193

    Article  CAS  Google Scholar 

  • Lee SG, Koh HY, Han SJ, Park H, Na DC, Kim I-C, Lee HK, Yim JH (2010) Expression of recombinant endochitinase from the Antarctic bacterium, Sanguibacter antarcticus KOPRI 21702 in Pichia pastoris by codon optimization. Protein Expr Purif 71:108–114

    Article  PubMed  CAS  Google Scholar 

  • Li Z, Xiong F, Lin Q, D’anjou M, Daugulis AJ, Yang DSC, Hew CL (2001) Low-temperature increases the yield of biologically active herring antifreeze protein in Pichia pastoris. Protein Expr Purif 21:438–445

    Article  PubMed  Google Scholar 

  • Lunn CA, Kathju S, Wallace BJ, Kushner SR, Pigiet V (1984) Amplification and purification of plasmid-encoded thioredoxin from Escherichia coli K12. J Biol Chem 259:10469–10474

    PubMed  CAS  Google Scholar 

  • Niiranen L, Espelid S, Karlsen CR, Mustonen M, Paulsen SM, Heikinheimo P, Willassen NP (2007) Comparative expression study to increase the solubility of cold adapted Vibrio proteins in Escherichia coli. Protein Expr Purif 52:210–218

    Article  PubMed  CAS  Google Scholar 

  • Park KS, Do H, Lee JH, Park SI, Kim E, Kim SJ, Kang SH, Kim HJ (2012) Characterization of the ice-binding protein from Arctic yeast Leucosporidium sp. AY30. Cryobiology 64:286–296

    Article  PubMed  CAS  Google Scholar 

  • Pfeffer J, Richter S, Nieveler J, Hansen C-E, Rhlid RB, Schmid RD, Rusnak M (2006) High yield expression of Lipase A from Candida antarctica in the methylotrophic yeast Pichia pastoris and its purification and characterisation. Appl Microbiol Biotechnol 72:931–938

    Article  PubMed  CAS  Google Scholar 

  • Phadtare S (2011) Unwinding activity of cold shock proteins and RNA metabolism. RNA Biol 8:394–397

    Article  PubMed  CAS  Google Scholar 

  • Phadtare S (2012) Escherichia coli cold-shock gene profiles in response to over-expression/deletion of CsdA, RNase R and PNPase and relevance to low-temperature RNA metabolism. Genes Cells 17:850–874

    Article  PubMed  CAS  Google Scholar 

  • Qing G, Ma LC, Khorchid A, Swapna GV, Mal TK, Takayama MM, Xia B, Phadtare S, Ke H, Acton T, Montelione GT, Ikura M, Inouye M (2004) Cold-shock induced high-yield protein production in Escherichia coli. Nat Biotechnol 22:877–882

    Article  PubMed  CAS  Google Scholar 

  • Ramli ANM, Mahadi NM, Rabu A, Murad AMA, Bakar FDA, Illias RM (2011) Molecular cloning, expression and biochemical characterisation of a cold-adapted novel recombinant chitinase from Glaciozyma antarctica PI12. Microb Cell Fact 10:1–13

    Article  Google Scholar 

  • Ramli ANM, Mahadi NM, Shamsir MS, Rabu A, Joyce-Tan KH, Murad AMA, Illias RM (2012) Structural prediction of a novel chitinase from the psychrophilic Glaciozyma antarctica PI12 and an analysis of its structural properties and function. J Comput Aided Mol Des 26:947–961

    Article  PubMed  CAS  Google Scholar 

  • Rathnayaka T, Tawa M, Sohya S, Yohda M, Kuroda Y (2010) Biophysical characterization of highly active recombinant Gaussia luciferase expressed in Escherichia coli. BBA—Proteins and Proteomics 1804:1902–1907

    Article  PubMed  CAS  Google Scholar 

  • Sørensen HP (2010) Towards universal systems for recombinant gene expression. Microb Cell Fact 9:1–4

    Article  Google Scholar 

  • Tamura M, Ito K, Kunihiro S, Yamasaki C, Haragauchi M (2011) Production of human β-actin and a mutant using a bacterial expression system with a cold shock vector. Protein Expr Purif 78:1–5

    Article  PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Rosli Md. Illias .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2014 Springer-Verlag Berlin Heidelberg

About this chapter

Cite this chapter

Md. Illias, R., Ramli, A.N.M., Low, K.O., Muhammad Mahadi, N., Abdul Murad, A.M., Rabu, A. (2014). Heterologous Expression of Proteins from Cold-Adapted Yeasts in Suitable Hosts: Methods and Applications. In: Buzzini, P., Margesin, R. (eds) Cold-adapted Yeasts. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-39681-6_22

Download citation

Publish with us

Policies and ethics