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Molecular Genetics of the Class III Region of the HLA Complex

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Immunobiology of HLA

Abstract

The class III region of the HLA complex is located between the class I and class II regions. Whereas HLA class I and class II genes encode sets of structurally related, highly polymorphic transplantation antigens, the class III region consists of at least four types of genes, only two of which have obvious functions in the immune system. Unlike the highly polymorphic class I and II genes, class III genes display a low to moderate degree of genetic variability, but are nevertheless subject to evolutionary mechanisms observed elsewhere in the HLA complex, including gene conversions and changes in gene copy number due to unequal crossing-over during meiosis.

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References

  1. Lawrence SK, Smith CL, Srivastava R, Cantor CR, Weiss-man SM. Megabase-scale mapping of the HLA gene complex by pulsed field gel electrophoresis. Science 1987; 235: 1387.

    Article  Google Scholar 

  2. Dunham I, Sargent CA, Trowsdale J, Campbell RD. Molecular mapping of the human major histocompatibility complex by pulsed-field gel electrophoresis. Proc Natl Acad Sci USA 1987; 84: 7237.

    Article  CAS  PubMed  Google Scholar 

  3. Carroll MC, Katzman P, Alicot EM, et al. Linkage map of the human major histocompatibility complex including the tumor necrosis factor genes. Proc Natl Acad Sci USA 1987; 84: 8535.

    Article  CAS  PubMed  Google Scholar 

  4. Old LJ. Tumor necrosis factor (TNF). Science 1985; 230: 630.

    Article  CAS  PubMed  Google Scholar 

  5. Beutler B, Cerami A. Cachectin and tumour necrosis factor as two sides of the same biological coin. Nature 1986; 320: 584.

    Article  CAS  PubMed  Google Scholar 

  6. Drysdale BE, Agarwal S, Shin HA. Macrophage-mediated tumoricidal activity: mechanisms of activation and cytotoxicity. Progr Allergy 1988; 40: 111.

    CAS  Google Scholar 

  7. Ruddle NH, Homer R. The role of lymphotoxin in inflammation. Progr Allergy 1988; 40: 162.

    CAS  Google Scholar 

  8. Pennica D, Nedwin GE, Hay flick JS, et al. Human tumour necrosis factor: precursor structure, expression and homology to lymphotoxin. Nature 1984; 312: 724.

    Article  CAS  PubMed  Google Scholar 

  9. Gray PW, Aggarwal BB, Benton CV, et al. Cloning and expression of cDNA for human lymphotoxin, a lymphokine with tumour necrosis activity. Nature 1984; 312: 721.

    Article  CAS  PubMed  Google Scholar 

  10. Nedwin GE, Nay lor SL, Sakaguchi AY, et al. Human lymphotoxin and tumor necrosis factor genes: structure, homology and chromosomal localization. Nucl Acids Res 1985; 13: 6361.

    Article  CAS  PubMed  Google Scholar 

  11. Spies T, Morton CC, Nedospasov SA, Fiers W, Pious D, Strominger JL. Genes for the tumor necrosis factors α and β are linked to the human major histocompatibility complex. Proc Natl Acad Sci USA 1986; 83: 8699.

    Article  CAS  PubMed  Google Scholar 

  12. Rother K, Rother U. The reactivity of the complement system. Progr Allergy 1986; 39: 8.

    CAS  Google Scholar 

  13. Porter RR. The complement components coded in the major histocompatibility complexes and their biological activities. Immunol Rev 1985; 87: 7.

    Article  CAS  PubMed  Google Scholar 

  14. Campbell RD, Bentley DR. The structure and genetics of the C2 and factor B genes. Immunol Rev 1985; 87: 19.

    Article  CAS  PubMed  Google Scholar 

  15. Morley BA, Campbell RD. Internal homologies of the Ba fragment from human complement component Factor B, a class III MHC antigen. EMBO J 1984; 3: 153.

    CAS  PubMed  Google Scholar 

  16. Campbell RD, Porter RR. Molecular cloning and characterization of the gene coding for human complement protein Factor B. Proc Natl Acad Sci USA 1983; 80: 4464.

    Article  CAS  PubMed  Google Scholar 

  17. Glass D, Raum D, Gibson D, Stillman JS, Schur PH. Inherited deficiency of the second component of complement. J Clin Invest 1976; 58: 853.

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  18. Ruddy S. Complement deficiencies 3. The second component. Progr Allergy 1986; 39: 250.

    CAS  Google Scholar 

  19. Cole FS, Whitehead AS, Auerbach HS, et al. The molecular basis for the genetic deficiency of the second component of human complement. N Engl J Med 1985; 313: 11.

    Article  CAS  PubMed  Google Scholar 

  20. Meo T, Atkinson JP, Bernoco M, Bernoco D, Ceppellini R. Structural heterogeneity of C2 complement protein and its genetic variants in man: a new polymorphism of the HLA region. Proc Natl Acad Sci USA 1977; 74: 1672.

    Article  CAS  PubMed  Google Scholar 

  21. Fu SM, Stern R, Kunkel HG, et al. MLC-determinants and C2 deficiency: LD-7a associated with C2 deficiency in four families. J Exp Med 1975; 142: 495.

    Article  CAS  PubMed  Google Scholar 

  22. Allen FH. Linkage of HL-A and GBG. Vox Sang 1974; 27: 382.

    Article  PubMed  Google Scholar 

  23. Cross SJ, Edwards JH, Bentley DR, Campbell RD. DNA polymorphism of the C2 and factor B genes. Immunogenetics 1985; 21: 39.

    Article  CAS  PubMed  Google Scholar 

  24. Levi-Strauss M, Carroll MC, Steinmetz M, Meo T. A previously undetected MHC gene with an unusual periodic structure. Science 1988; 240: 201.

    Article  CAS  PubMed  Google Scholar 

  25. Goldberger G, Colton HR. Precursor complement protein (Pro-C4) is converted in vitro to native C4 by plasmin. Nature 1980; 286: 514.

    Article  CAS  PubMed  Google Scholar 

  26. Carroll MC, Belt KT, Palsdottir A, Yu Y. Molecular genetics of the fourth component of human complement and 21-hydroxylase. Immunol Rev 1985; 87: 39.

    Article  CAS  PubMed  Google Scholar 

  27. Schendel DJ, O’Neill GJ, Wank R. MHC-linked class III genes, analysis of C4 gene frequencies, complotypes and associations with distinct HLA haplotypes in German Caucasians. Immunogenetics 1984; 20: 23.

    Article  CAS  PubMed  Google Scholar 

  28. O’Neill GJ, Yang SY, Dupont B. Two HLA-linked loci controlling the fourth component of human complement. Proc Natl Acad Sci USA 1978; 75: 5165.

    Article  PubMed  Google Scholar 

  29. O’Neill GJ, Yang SY, Tegoli J, Berger R, Dupont B. Chido and Rodgers blood groups are distinct antigenic components of human C4. Nature 1978; 273: 668.

    Article  PubMed  Google Scholar 

  30. Hauptmann G, Goetz I, Uring-Lambert B, Grossehaus E. Complement deficiency 2. The fourth component. Progr Allergy 1985; 39: 232.

    Google Scholar 

  31. Dawkins RL, Christiansen FT, Kay PH, et al. Disease associations with complotypes, supratypes and haplotypes. Immunol Rev 1983; 70: 5.

    Article  CAS  PubMed  Google Scholar 

  32. Law SKA, Dodds AW, Porter RR. A comparison of the properties of two classes, C4A and C4B, of the human complement component C4. EMBO J 1984; 3: 1819.

    CAS  PubMed  Google Scholar 

  33. Rittner C, Hauptmann G, Grosse-Wilde H, Grosshans E, Tongio MM, Mayer S. Linkage between HL-A (major histocompatibility complex) and genes controlling synthesis of the fourth component of complement. In: Histocompatibility Testing. Copenhagen: Munksgaard, 1975: 945.

    Google Scholar 

  34. Belt KT, Carroll MC, Porter RR. The structural basis of the multiple forms of human complement component C4. Cell 1984; 36: 907.

    Article  CAS  PubMed  Google Scholar 

  35. Carroll MC, Campbell RD, Bentley DR, Porter RR. A molecular map of the major histocompatibility complex class III region of man linking complement genes C4, C2 and factor B. Nature 1984; 307: 237.

    Article  CAS  PubMed  Google Scholar 

  36. Prentice HL, Schneider PM, Strominger JL. C4B gene polymorphism detected in a human cosmid clone. Immunogenetics 1986; 23: 274.

    Article  CAS  PubMed  Google Scholar 

  37. Carroll MC, Campbell RD, Porter RR. The mapping of 21-hydroxylase genes adjacent to complement component genes in HLA, the major histocompatibility complex in man. Proc Natl Acad Sci USA 1985; 82: 521.

    Article  CAS  PubMed  Google Scholar 

  38. White PC, Grossberger D, Onufer BJ, New MI, Dupont B, Strominger JL. Proc Natl Acad Sci USA 1985; 82: 1089.

    Article  CAS  PubMed  Google Scholar 

  39. White PC, New MI, Dupont B. Congenital adrenal hyperplasia. N Engl J Med 1987; 316: 1519, 1580.

    Article  CAS  PubMed  Google Scholar 

  40. Dupont B, Oberfield SE, Smithwick EM, Lee TD, Levine LS. Close genetic linkage between HLA and congenital adrenal hyperplasia (21-hydroxylase deficiency). Lancet 1977; 2: 1309.

    Article  CAS  PubMed  Google Scholar 

  41. Kohn B, Levine LS, Pollack MS, et al. Late-onset steroid 21-hydroxylase deficiency: a variant of classical congenital adrenal hyperplasia. J Clin Endocrinol Metab 1982; 55: 817.

    Article  CAS  PubMed  Google Scholar 

  42. Kominami S, Ochi H, Kobayashi Y, Takemori S. Studies on the steroid hydroxylation system in adrenal cortex microsomes: purification and characterization of cytochrome P-450 specific for steroid C-21 hydroxylation. J Biol Chem 1980; 255: 3386.

    CAS  PubMed  Google Scholar 

  43. Higashi Y, Yoshioka H, Yamane M, Gotoh O, Fujii- Kuriyama Y. Complete nucleotide sequence of two steroid 21-hydroxylase genes tandemly arranged in human chromosome: a pseudogene and a genuine gene. Proc Natl Acad Sci USA 1986; 83: 2841.

    Google Scholar 

  44. White PC, New M, Dupont B. Structure of human steroid 21-hydroxylase genes. Proc Natl Acad Sci USA 1986: 83: 5111.

    Article  CAS  PubMed  Google Scholar 

  45. White PC, Chaplin DD, Weis JH, et al. Two steroid 21-hydroxylase genes are located in the murine S region. Nature 1984; 312: 465.

    Article  CAS  PubMed  Google Scholar 

  46. Chung BC, Matteson KJ, Miller WL. Structure of a bovine gene for P-450c21 (steroid 21-hydroxylase) defines a novel cytochrome P-450 gene family. Proc Natl Acad Sci USA 1986; 83: 4243.

    Article  CAS  PubMed  Google Scholar 

  47. Carroll MC, Palsdottir A, Belt KT, Porter RR. Deletion ol complement C4 and steroid 21-hydroxylase genes in the HLA class III region. EMBO J 1985; 4: 2547.

    Google Scholar 

  48. Rumbsy G, Carroll MC, Porter RR, Grant DB, Hjelm M. Deletion of the steroid 21-hydroxylase and complement C4 genes in congenital adrenal hyperplasia. J Med Genet 1986; 23: 204.

    Article  Google Scholar 

  49. Jospe N, Donohoue PA, Van Dop C, McLean RH, Bias WB, Migeon CJ. Prevalence of polymorphic 21-hydroxylase gene (CA21HB) mutations in salt-losing congenital adrenal hyperplasia. Biochem Biophys Res Commun 1987; 142: 798.

    Article  CAS  PubMed  Google Scholar 

  50. White PC, Vitek A, New MI, Dupont B. Characterization of frequent deletions causing steroid 21-hydroxylase deficiency. Proc Natl Acad Sci USA 1988; 85: 4436.

    Article  CAS  PubMed  Google Scholar 

  51. Yu CY, Campbell RD. Definitive RFLPs to distinguish between the human complement C4A/C4B isotypes and the major Rodgers/Chido determinants. Immunogenetics 1987; 25: 383.

    Article  PubMed  Google Scholar 

  52. Palsdottir A, Arnason A, Fossdal R, Jenssen O. Gene organization of haplotypes expressing 2 different C4A allotypes. Hum Genet 1987; 76: 220.

    Article  CAS  PubMed  Google Scholar 

  53. Harada F, Kimur A, Iwanaga T, Shimozawa K, Yata J, Sasazuki T. Gene-conversion-like events cause steroid 21-hydroxylase deficiency in congenital adrenal hyperplasia. Proc Natl Acad Sci USA 1987; 84: 8091.

    Article  CAS  PubMed  Google Scholar 

  54. Globerman H, Amor M, Parker KL, New MI, White PC. A nonsense mutation causing steroid 21-hydroxylase deficiency. J Clin Invest 1988; 82: 139.

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  55. Higashi Y, Tanae A, Inoue H, Fujii-Kuriyama Y. Evidence for frequent gene conversion in the steroid 21-hydroxylase P-450 (C21) gene: implications for steroid 21-hydroxylase deficiency. Am J Hum Genet 1988; 42: 17.

    CAS  PubMed Central  PubMed  Google Scholar 

  56. Amor M, Parker KL, Globerman H, New MI, White PC. Mutation in the CYP21B gene (lie-172 to Asn) causes steroid 21-hydroxylase deficiency. Proc Natl Acad Sci USA 1988; 85: 1600.

    Article  CAS  PubMed  Google Scholar 

  57. Speiser PW, New MI, White PC. Molecular genetic analysis of non-classic steroid 21-hydroxylase deficiency associated with the HLA haplotype B14;DR1. N Engl J Med 1988; 319: 19.

    Article  CAS  PubMed  Google Scholar 

  58. Rodrigues NR, Dunham I, Yu CY, Carroll MC, Porter RR, Campbell RD. Molecular characterization of the HLA- linked steroid 21-hydroxylase B gene from an individual with congenital adrenal hyperplasia. EMBO J 1987; 6: 1653.

    CAS  PubMed  Google Scholar 

  59. Smith GR, Kunes SM, Schultz DW, Taylor A, Triman KL. Structure of chi hotspots of generalized recombination. Cell 1981; 24: 429.

    Article  CAS  PubMed  Google Scholar 

  60. Wu S, Saunders TL, Bach FH. Polymorphism of human la antigens generated by reciprocal intergenic exchange between two DR (3 loci. Nature 1986; 324: 676.

    Article  CAS  PubMed  Google Scholar 

  61. Awdeh ZL, Raum D, Yunis EJ, Alper CA. Extended HLA/complement allele haplotypes: evidence for T/t-like complex in man. Proc Natl Acad Sci USA 1983; 80: 259.

    Article  CAS  PubMed  Google Scholar 

  62. Baur MP, Neugebauer M, Albert ED. Reference tables of 3 locus haplotype frequencies and delta values in Caucasians, Orientals and Negroids. In: Albert ED, Baur MP, Mayr WR (eds). Histocompatibility Testing 1984. Berlin: Springer- Verlag, 1985: 756.

    Google Scholar 

  63. White PC, New MI, Dupont B. HLA-linked congenital adrenal hyperplasia results from a defective gene encoding a cytochrome P-450 specific for steroid 21-hydroxylation. Proc Natl Acad Sci USA 1984; 81: 1986.

    Google Scholar 

  64. Werkmeister JW, New MI, Dupont B, White PC. Frequent deletion and duplication of the steroid 21-hydroxylase genes. Am J Hum Genet 1986; 39: 461.

    CAS  PubMed Central  PubMed  Google Scholar 

  65. Silver LM, Artzt K. Recombination suppression of mouse T-haplotype due to chromatin mismatching. Nature 1981; 290: 68.

    Article  CAS  PubMed  Google Scholar 

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White, P.C. (1989). Molecular Genetics of the Class III Region of the HLA Complex. In: Dupont, B. (eds) Immunobiology of HLA. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-662-39946-0_6

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  • DOI: https://doi.org/10.1007/978-3-662-39946-0_6

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-662-38980-5

  • Online ISBN: 978-3-662-39946-0

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