Abstract
Clustering of tumor plays a significant part in classifying malignancies from carcinoma genetic data and hence is introduced to deal among the classification problem. It is used in critical applications like cancer treatment for diagnosis and prognosis, analysis of gene expression and related areas. In earlier research works, various tumor clustering schemes were presented based on the single clustering systems and implemented successfully to a variety of biomolecular data for cancer class detection. But, it suffered from some drawbacks similar to starvation of stability, accuracy, and robustness. The ensemble grouping schemes are introduced to overcome these limitations. In this research work, efficient dimensionality reduction is done by using Enhanced Independent Component Analysis (EICA) and effective Feature Selection (FS) using Geometric Particle Swarm Optimization (GPSO) are used. Finally, the competent Adaptive Weighted Fuzzy C-Means Clustering (AWFCM) with metaheuristic optimization scheme of Bacterial Evolutionary Algorithm (BEA) is also proposed. It improves the performance of tumor clustering of biomolecular data. The performance of various ensemble clustering schemes is evaluated based on the efficient feature selection methods.
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References
Ahmad, P., Qamar, S., Rizvi, S.Q.A.: Techniques of data mining in health care—a review. Int. J. Comput. Appl. 120(1), 0975–8887 (2015)
Khaleel, M.A., Pradham, S.K., Dash, G.N.: A survey of data mining techniques on medical data for finding locally frequent diseases. Int. J. Adv. Res. Comput. Sci. Softw. Eng. 3(8) (2013). ISSN 2277 128X
Golub, T.R., et al.: Molecular classification of cancer: class discovery and class prediction by gene expression monitoring. Science 286(5439), 531–537 (1999)
Hanahan, D., Weinberg, R.A.: The hallmarks of cancer. Cell 100(1), 57–70 (2000)
Statnikov, A., et al.: GEMS: a system for automated cancer diagnosis and biomarker discovery from microarray gene expression data. Int. J. Med. Inf. 74(7), 491–503 (2005)
Dunn, J.C.: A fuzzy relative of the ISODATA process and its use in detecting compact well-separated clusters. 32–57 (1973)
Dudoit, S., Fridlyand, J., Speed, T.P.: Comparison of discrimination methods for the classification of tumors using gene expression data. J. Am. Stat. Assoc. 97(457), 77–87 (2002)
Shi, J., Malik, J.: Normalized cuts and image segmentation. IEEE Trans. Pattern Anal. Mach. Intell. 22(8), 888–905 (2000)
Fern, X.Z., Brodley, C.E.: Solving cluster ensemble problems by bipartite graph partitioning. In: Proceedings of the Twenty-First International Conference on Machine Learning. ACM (2004)
Yu, Z., Chen, H., You, J., Han, G., Li, L.: Hybrid fuzzy cluster ensemble framework for tumor clustering from biomolecular data. IEEE/ACM Trans. Comput. Biol. Bioinf. 10(3), 657–670 (2013)
Yu, Z., Wong, H.S., Wang, H.: Graph-based consensus clustering for class discovery from gene expression data. Bioinformatics 23(21), 2888–2896 (2007)
Tsukasaki, K., et al.: Definition, prognostic factors, treatment, and response criteria of adult T-cell leukemia-lymphoma: a proposal from an international consensus meeting. J. Clin. Oncol. 27(3), 453–459 (2009)
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Sangeetha, M., Karthikeyan, N.K., Tamijeselvy, P., Nachammai, M. (2019). Cancer Prediction Through a Bacterial Evolutionary Algorithm Based Adaptive Weighted Fuzzy C-Means Approach. In: Bhatia, S., Tiwari, S., Mishra, K., Trivedi, M. (eds) Advances in Computer Communication and Computational Sciences. Advances in Intelligent Systems and Computing, vol 759. Springer, Singapore. https://doi.org/10.1007/978-981-13-0341-8_9
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DOI: https://doi.org/10.1007/978-981-13-0341-8_9
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