Volume 20, supplement issue 2, April 2019
Selected articles from the 17th Asia Pacific Bioinformatics Conference (APBC 2019): genomics
- Issue editors
-
- David Sankoff
- Guoliang Li
- Louxin Zhang
- Yi-Ping Phoebe Chen
- Shaoliang Peng
- Hong-Yu Zhang
15 articles in this issue
-
-
Genome-wide analysis of epigenetic dynamics across human developmental stages and tissues
Authors (first, second and last of 5)
- Xia Zhang
- Yanglan Gan
- Shuigeng Zhou
- Content type: Research
- Open Access
- Published: 04 April 2019
- Article: 221
-
A distance-type measure approach to the analysis of copy number variation in DNA sequencing data
Authors
- Bipasa Biswas
- Yinglei Lai
- Content type: Research
- Open Access
- Published: 04 April 2019
- Article: 195
-
Signal enrichment with strain-level resolution in metagenomes using topological data analysis
Authors (first, second and last of 4)
- Aldo Guzmán-Sáenz
- Niina Haiminen
- Laxmi Parida
- Content type: Research
- Open Access
- Published: 04 April 2019
- Article: 194
-
DeepHistone: a deep learning approach to predicting histone modifications
Authors (first, second and last of 5)
- Qijin Yin
- Mengmeng Wu
- Rui Jiang
- Content type: Research
- Open Access
- Published: 04 April 2019
- Article: 193
-
MRCNN: a deep learning model for regression of genome-wide DNA methylation
Authors (first, second and last of 6)
- Qi Tian
- Jianxiao Zou
- Shicai Fan
- Content type: Research
- Open Access
- Published: 04 April 2019
- Article: 192
-
ENIGMA: an enterotype-like unigram mixture model for microbial association analysis
Authors (first, second and last of 4)
- Ko Abe
- Masaaki Hirayama
- Teppei Shimamura
- Content type: Research
- Open Access
- Published: 04 April 2019
- Article: 191
-
Improving the sensitivity of long read overlap detection using grouped short k-mer matches
Authors
- Nan Du
- Jiao Chen
- Yanni Sun
- Content type: Research
- Open Access
- Published: 04 April 2019
- Article: 190
-
Microbiota in the apical root canal system of tooth with apical periodontitis
Authors (first, second and last of 6)
- Wenhao Qian
- Ting Ma
- Pei Hao
- Content type: Research
- Open Access
- Published: 04 April 2019
- Article: 189
-
A secure SNP panel scheme using homomorphically encrypted K-mers without SNP calling on the user side
Authors (first, second and last of 8)
- Sungjoon Park
- Minsu Kim
- Sun Kim
- Content type: Research
- Open Access
- Published: 04 April 2019
- Article: 188
-
Meta-network: optimized species-species network analysis for microbial communities
Authors (first, second and last of 4)
- Pengshuo Yang
- Shaojun Yu
- Kang Ning
- Content type: Research
- Open Access
- Published: 04 April 2019
- Article: 187
-
Large-scale 3D chromatin reconstruction from chromosomal contacts
Authors (first, second and last of 5)
- Yanlin Zhang
- Weiwei Liu
- Shuaicheng Li
- Content type: Research
- Open Access
- Published: 04 April 2019
- Article: 186
-
Explore mediated co-varying dynamics in microbial community using integrated local similarity and liquid association analysis
Authors (first, second and last of 6)
- Dongmei Ai
- Xiaoxin Li
- Li C. Xia
- Content type: Research
- Open Access
- Published: 04 April 2019
- Article: 185
-
GPU accelerated sequence alignment with traceback for GATK HaplotypeCaller
Authors (first, second and last of 4)
- Shanshan Ren
- Nauman Ahmed
- Zaid Al-Ars
- Content type: Research
- Open Access
- Published: 04 April 2019
- Article: 184
-
Estimating the total genome length of a metagenomic sample using k-mers
Authors
- Kui Hua
- Xuegong Zhang
- Content type: Research
- Open Access
- Published: 04 April 2019
- Article: 183