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Detection of Essential Genes in Streptococcus pneumoniae Using Bioinformatics and Allelic Replacement Mutagenesis

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Microbial Gene Essentiality: Protocols and Bioinformatics

Part of the book series: Methods in Molecular Biology™ ((MIMB,volume 416))

Abstract

Although the emergence and spread of antimicrobial resistance in major bacterial pathogens for the past decades poses a growing challenge to public health, discovery of novel antimicrobial agents from natural products or modification of existing antibiotics cannot circumvent the problem of antimicrobial resistance. The recent development of bacterial genomics and the availability of genome sequences allow the identification of potentially novel antimicrobial agents. The cellular targets of new antimicrobial agents must be essential for the growth, replication, or survival of the bacterium. Conserved genes among different bacterial genomes often turn out to be essential (1, 2). Thus, the combination of comparative genomics and the gene knock-out procedure can provide effective ways to identify the essential genes of bacterial pathogens (3). Identification of essential genes in bacteria may be utilized for the development of new antimicrobial agents because common essential genes in diverse pathogens could constitute novel targets for broad-spectrum antimicrobial agents.

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© 2008 Humana Press Inc., a part of Springer Science+Business Media, LLC

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Song, JH., Ko, K.S. (2008). Detection of Essential Genes in Streptococcus pneumoniae Using Bioinformatics and Allelic Replacement Mutagenesis. In: Osterman, A.L., Gerdes, S.Y. (eds) Microbial Gene Essentiality: Protocols and Bioinformatics. Methods in Molecular Biology™, vol 416. Humana Press. https://doi.org/10.1007/978-1-59745-321-9_28

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  • DOI: https://doi.org/10.1007/978-1-59745-321-9_28

  • Publisher Name: Humana Press

  • Print ISBN: 978-1-58829-378-7

  • Online ISBN: 978-1-59745-321-9

  • eBook Packages: Springer Protocols

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